Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0194 ATGACCGGCGCAGGATCTTCAGGGAGGATGCCCACTTTGAAAGAGAGAGAAAACAATAAGAAGAGGGAACGGCGCAGAAGAGCGATTGCTGCCAAGATCTATACCGGCCTCAGAGCACAGGGGAACTATAAGCTTCCCAAGCACTGTGACAACAACGAGGTCTTAAAGGCTCTCTGCGCTGAAGCTGGTTGGATTGTTGAGGACGATGGAACTACCTATCGAAAGGGATGCAGGCCACCCCCAAATGAGAATGGAGGAACTTCAGTTAATATCAGTGCTTGTTCTTCCATGCAGCCAAGCCCACAATCGTCATCATTCCCAAGTCCTGTGCCTTCCTACCAGGCTAGCCCGTCTTCATCCTCCTTCCCTAGCCCCACTCGCATTGATGGAAATTCCTCTTCATTTCTGCTCCCATTCATTCGAAATATAGTGTCCATTCCTGCAAATCTTCCCCCTCTCAGGATATCTAACAGCGCTCCTGTAACCCCGCCTCTTTCTTCTCCAACTTCCAGAAGGTCAAAGCGAAAATCAGATTTCGAGTCTCTCTCCAATGGCTCTCTTAAATCCTTCTGCAACCCACTTCTTGCTGCCTCCGCCCCATCAAGTCCTACGCGCCGTCACAATGCTGCAGCTTCGACTATTCCAGTATGTGATGAGTCCGATACTTCTACAGTGCACTCTGGTCGATGGGTCAATTTTCAGCCGGCAACGGGTGCTTCCGTCGCTCCTCCTTCGCCCACCTTTAATCTTATGAAACCGGTGGTCCAACAAATTTCTCATCAGAATTCCTTTGATATGAATGGAGGCGCACATTTGAATCCAGCTCCAGCTGCAGAGAAGGGGCGAGGATCAGACTTTGAGTTTGAGAACGGTAGAGTGAAACCGTGGGAGGGCGAGATAATAGTACAAGAGGGGGGAATGGATGATTTGGAGCTTACTCTTGGGTGTGGAAAGGCGTAA 960 0.499 MTGAGSSGRMPTLKERENNKKRERRRRAIAAKIYTGLRAQGNYKLPKHCDNNEVLKALCAEAGWIVEDDGTTYRKGCRPPPNENGGTSVNISACSSMQPSPQSSSFPSPVPSYQASPSSSSFPSPTRIDGNSSSFLLPFIRNIVSIPANLPPLRISNSAPVTPPLSSPTSRRSKRKSDFESLSNGSLKSFCNPLLAASAPSSPTRRHNAAASTIPVCDESDTSTVHSGRWVNFQPATGASVAPPSPTFNLMKPVVQQISHQNSFDMNGGAHLNPAPAAEKGRGSDFEFENGRVKPWEGEIIVQEGGMDDLELTLGCGKA 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0194 319 Pfam BES1/BZR1 plant transcription factor, N-terminal 6 130 IPR008540 -
Lele49g0194 319 MobiDBLite consensus disorder prediction 152 170 - -
Lele49g0194 319 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 316 IPR033264 GO:0003700|GO:0006351|GO:0009742
Lele49g0194 319 MobiDBLite consensus disorder prediction 83 126 - -
Lele49g0194 319 MobiDBLite consensus disorder prediction 70 126 - -
Lele49g0194 319 MobiDBLite consensus disorder prediction 152 183 - -
Lele49g0194 319 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0194 Lele-ChrLele49 1159144 1160656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0194 28 319 BZR Transcription Factor Family AT1G75080 57.329 5.23e-98 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Lele49g0194 BES1_N 1.2e-63 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0194 49 1159144 1160656 Lele51g0209 51 1178331 1179850 hybridization