Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0187 ATGACAGCTGTAATGCGGAGGGTGGCACGTGTCGCGGAGGAAGCCCTAATAGCGGCAGACTCCCATAGGGCACCGCCACACCCGATCCCATCCGCTACATTCTCTTCCTTCCTTCTATGGTCGTTGCTGGTATCACTAATGTCTTCTCATCCTTTGGGTTGGATGTGTTTGCCTAAACTGGTCTGGATGGGGACAGGGGAAGAGAACACGCCTAAACCATCCAAACAAGCTTCTACAACTCAGGAGATACCAACAACACCTTCATACCCTGATTGGTCCAGCTCTATGCAGGCTTATTATGCTCCTGGAGCCACCCCGCCTCCTTTTTTTGCCTCAACTGTTGGATCACCAACTCCTCACCCCTATCTGTGGGGGAGCCAGCACCCTCTAATTCCTCCGTATGGGACACCAGTTCCATACCCTCCTATGTATCCTCCAGGCGGTGTTTATGCTCATCCTGGTATGGCCACGACTCCAAGCCCCGTACAGAAAACTGCAGAACCTGAAGGTAAGGGACATAATGGAAAAGATCAGAATTCAGCCAAAAAATTGAAGGGAACTTCTGCTAATACAGGTTCCAAAGCCGGAGAAAGTGGAAAAGTAGGCTCAGGATCCGGGAATGATGGTGTCTCTCAAAGTATTGAAAGTGGTTCGGAGGGTTCATCTGATGCAAGCGATGAGAATACTAACCAACAGGATTCAACTATTAACAAGAAGGGAAGCTTTGACCAGATGCTTGTTGATGGAGCAAATGCACAGAACAGTTCTGGTGGTACCATTTCTCATAAGCCAGAAACTAATCTTAATATGGGAATAGACTTGTGGAGTGCATCTGCTGCTGGTTCAGATGTTGCAAAAATGAGACATAATCAATCTGGTGTTTCAGCAGCTGTTGCTCCTTCGACCATAATGGGAAGGGAAGTTGCCCCTGGTGAACATTGGATACAAGACGAGCGTGAACTGAAGAGACAGAAGAGGAAGCAGTCTAATAGAGAGTCAGCTAGGAGGTCCAGACTGCGGAAGCAGGCTGAATGTGAAGAGTTACAGAAGAGGGTGGATACACTAGGAAATGAGAATCGAACTCTAAGAGAGGAGCTCCAGAGGCTTTCTGAAGAATGTGAGAACCTTGCGTCTGAAAATAATTCTATCAAGGAAGAGTTGGACCGGCTGTGTAGGCCTGATGCAGTTGCTTAA 1194 0.4791 MTAVMRRVARVAEEALIAADSHRAPPHPIPSATFSSFLLWSLLVSLMSSHPLGWMCLPKLVWMGTGEENTPKPSKQASTTQEIPTTPSYPDWSSSMQAYYAPGATPPPFFASTVGSPTPHPYLWGSQHPLIPPYGTPVPYPPMYPPGGVYAHPGMATTPSPVQKTAEPEGKGHNGKDQNSAKKLKGTSANTGSKAGESGKVGSGSGNDGVSQSIESGSEGSSDASDENTNQQDSTINKKGSFDQMLVDGANAQNSSGGTISHKPETNLNMGIDLWSASAAGSDVAKMRHNQSGVSAAVAPSTIMGREVAPGEHWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQKRVDTLGNENRTLREELQRLSEECENLASENNSIKEELDRLCRPDAVA 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0187 397 Pfam G-box binding protein MFMR 63 155 IPR012900 -
Lele49g0187 397 MobiDBLite consensus disorder prediction 181 266 - -
Lele49g0187 397 FunFam BZIP transcription factor 320 371 - -
Lele49g0187 397 SMART brlzneu 318 382 IPR004827 GO:0003700|GO:0006355
Lele49g0187 397 MobiDBLite consensus disorder prediction 66 88 - -
Lele49g0187 397 Pfam bZIP transcription factor 318 380 IPR004827 GO:0003700|GO:0006355
Lele49g0187 397 MobiDBLite consensus disorder prediction 69 88 - -
Lele49g0187 397 CDD bZIP_plant_GBF1 323 373 IPR045314 GO:0003700|GO:0006355
Lele49g0187 397 MobiDBLite consensus disorder prediction 151 266 - -
Lele49g0187 397 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 325 340 IPR004827 GO:0003700|GO:0006355
Lele49g0187 397 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 320 383 IPR004827 GO:0003700|GO:0006355
Lele49g0187 397 PANTHER G-BOX-BINDING FACTOR 3-RELATED 63 387 IPR044827 GO:0003700|GO:0006355|GO:0043565
Lele49g0187 397 SUPERFAMILY Leucine zipper domain 321 377 IPR046347 GO:0003700|GO:0006355
Lele49g0187 397 Coils Coil 331 386 - -
Lele49g0187 397 Gene3D - 321 375 - -
Lele49g0187 397 MobiDBLite consensus disorder prediction 317 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0187 Lele-ChrLele49 1120961 1126202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0187 63 397 bZIP Transcription Factor Family AT4G36730 52.632 1.86e-103 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele49g0187 MFMR 6.6e-30 No_clan