Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0185 ATGACGCGCCAAAGAGCTTTGCTGGCTTCGCCATTTTCATTTCTCTGGTTCTTCTTGTTCCTCACGCTTCCCTTGTATGGCAAGGCTTCGAGTTTTTCTGAGAATGTGACGAAGGAAGAAGAGAGTCCAGTGATAGGGAAATCTGAGTGGAGAAGAATAACAAGCACTGAATATGGAGAAGTGTCCACCATTGACGTCAATGGTGGACACAGATCAACCTTCCATCTTCAGTTATTTACACTCGAACCCAACTCTCTCTTCCTTCCTGTTCTTCTTCATGCAGACATGCTCTTCTACGTTCACACAGGGAGTGGAAGGCTGATTTGGGCATATGATGGTGATACTAAAAGGATAAATCTACGCCAAGGTGACATCTGCATGCTTGGAACAGGCCATGCTTTCTATTTACAGAGCAACCTGGAGGCACAAAGACAGAGACTTCGGATTTTTGCAATTTTCCCCAACTCGATTCATAATCATTACGACCCAGCAATTGGTGCTTATTCAAGAATCAGTGAACTGGTGGGAGGCTTCGATCAGAAAATCATGCAAGCAGCTTTTGGGGTGCCGGAGGAGCTAGCTGCAGAAATTTCAAACAAAACTGAGACCCCTGCAATAGTCCATGCTGTTTCGAAGGAGAAAAACAATATATTGGAATTGGAGGCTTGGATTCTACACAGAGTATTAGGTGGTGAGATTGCCACTGACGTGTCCTCCAACAACAATAAACCCCGGACATTTAATGTCTTCGACAAACATCCTGATTTCAAGAACAGTTATGGATGGAGCCTCATGGTGACCCAAAAACATTTGAAATCATTGAAGCATATCAACGTTGGCTTCCTGATGGTGAATTTGACCGTGGGAGCAATGATGGGGCCACACTGGAATCCACTGGCTGCAGAAATAGCAATGGTATTGGAAGGGGAAGGCATGGTTCGTGTGGTATGTGGGAGCAGCAATATGGACAAGTCCAAATGCCAGAACATGAGGTTTAAGGTGAAGCAGGGAGATGTTTTCATGGTTCCTAAGTTTCATCCAATGGCTCAGATGTCTTTCAACAATGACTCTCTGGTTTTCCTGGGCTTTAGTACCACAACGAAGAAGACCTATCCTCAGTTTTTAGCGGGAGAGAGATCAGTGCTACAGACCATAGATAAGCACATATTGGCTGCATCATTCAATATGAGTGACGAAACAACTAAGCAACTTTTGCATTCTCAGGAAGGATCCATCATATTAGGGTGTGCATCATGCGCAGAGGAAGAGGAAAGGATCTTGATAGAAGAAGCCAAAAGGAGAGAAGAGGAAAGAAGGAGAGAAGAAGAAGCACGGAGAAGAGAAGAGGAGAAGAGGAGACAGGAGGAAGAGGAGGAAGCAAGGAGGGAAGAGGAGAAAAGGAGAGAGGAGGAGGAAGCTAGAAGAGAGGCAGAAGAAGAGCAAAAGAGAGAAGAAGAAAAGGCAAAGGAAGAGCAAGGGGCTATGAGACAACAAGAAAGAAGGGAGGAAGAAAGGAGGAGGGAAGAAGAAAAGGCAAGAAGGCGACGAGAGGAAGAAGCCAAAAAGGAACAAGAACGAACAAGACAAGAAGAAGAAGCAGAAAGGGAGCGAAAGCGAGCTAGAGAGGAACAAGAAGAAAGGCAAAGGAGGCGACAAGAGGAGGAAGCAAAAGAGGAGCAAGAACAAGCTAGAAGAAAGAAAGAAGCAGCAGCAGAAATGGAGCAAGAACGAGCTAGAAAAGAAGAAGAACAAAGGGAAAGGAGGCGTCAACAAGAGGAAGAAGTAGAAGAAGAGCAAGAACAAATTAGGAGACAAGAAGAAAAAGCAACAAAGGAGCAAGAGCAAAGTAGAAAGGAACAAGAAGAAAGGGAAATGAGGCGTCAAAAGGAAGAAGCAGAAGAAATGCAAGAACAAGCAAGGAGCCACAGAAAAAGGAGCAAAAAAGGAGCAAGAGCGAGCTAG 1962 0.4485 MTRQRALLASPFSFLWFFLFLTLPLYGKASSFSENVTKEEESPVIGKSEWRRITSTEYGEVSTIDVNGGHRSTFHLQLFTLEPNSLFLPVLLHADMLFYVHTGSGRLIWAYDGDTKRINLRQGDICMLGTGHAFYLQSNLEAQRQRLRIFAIFPNSIHNHYDPAIGAYSRISELVGGFDQKIMQAAFGVPEELAAEISNKTETPAIVHAVSKEKNNILELEAWILHRVLGGEIATDVSSNNNKPRTFNVFDKHPDFKNSYGWSLMVTQKHLKSLKHINVGFLMVNLTVGAMMGPHWNPLAAEIAMVLEGEGMVRVVCGSSNMDKSKCQNMRFKVKQGDVFMVPKFHPMAQMSFNNDSLVFLGFSTTTKKTYPQFLAGERSVLQTIDKHILAASFNMSDETTKQLLHSQEGSIILGCASCAEEEERILIEEAKRREEERRREEEARRREEEKRRQEEEEEARREEEKRREEEEARREAEEEQKREEEKAKEEQGAMRQQERREEERRREEEKARRRREEEAKKEQERTRQEEEAERERKRAREEQEERQRRRQEEEAKEEQEQARRKKEAAAEMEQERARKEEEQRERRRQQEEEVEEEQEQIRRQEEKATKEQEQSRKEQEEREMRRQKEEAEEMQEQARSHRKRSKKGARAS 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0185 653 MobiDBLite consensus disorder prediction 433 653 - -
Lele49g0185 653 Gene3D Jelly Rolls 34 219 IPR014710 -
Lele49g0185 653 SMART Cupin_1_3 247 402 IPR006045 -
Lele49g0185 653 SMART Cupin_1_3 52 195 IPR006045 -
Lele49g0185 653 MobiDBLite consensus disorder prediction 433 641 - -
Lele49g0185 653 Gene3D Jelly Rolls 239 417 IPR014710 -
Lele49g0185 653 PANTHER OS03G0336100 PROTEIN-RELATED 16 419 - -
Lele49g0185 653 CDD cupin_7S_vicilin-like_C 254 411 - -
Lele49g0185 653 CDD cupin_7S_vicilin-like_N 53 214 - -
Lele49g0185 653 Pfam Cupin 247 401 IPR006045 -
Lele49g0185 653 Pfam Cupin 51 189 IPR006045 -
Lele49g0185 653 Coils Coil 417 645 - -
Lele49g0185 653 SUPERFAMILY RmlC-like cupins 73 409 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0185 Lele-ChrLele49 1112318 1114949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0185 1 434 Miscellaneous Gene Families AT2G18540 43.681 4.57e-112 351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0185 49 1112318 1114949 Lele51g0201 51 1136982 1140277 hybridization
Lele49g0185 49 1112318 1114949 Lele52g0203 52 1207015 1208161 hybridization