Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0183 ATGCCCATTGGCAGTAAGTGGTTCAATAATTATTTTACTGGAGATTGTGCCCCGTCATCATCTAGTTTGATAGAGACTTTTTTTTCCAAGGGAAAGAAGAAAAGGCAAGACTTATTTGAGCGCTCTTCCTCTGCATCATGTTTAGCAACAAAAATACGAACGCTTGGACGTGAATTTCAAGGAGACATTCCAATCCCATCTGAGCATACCATTAACTTCCAAAAATGGAACCCAAGACTGGATGATCAGATTGAGTTCACAGTCATTAAGCCAATGACTTCATCAGCATCGGCACAATCACAGAAAATCTGCACTTTGCGTCATTATCCCGTCTTGTTCATTCTTCACAGTACCCGCGTGCTTCCTCACTTCCCTATCTGGAATCCTTTACACAAGGAAAAAGATGGCTTCTTGCATTCGCTCAGCCGAAATGCTACCTTCTACTATCGTATTCTAAAAGCAATAACTGGGCATCAAGCAGTTCTCGGATCCTTGTACAGAAATTCAGCCCTGTCTCTTTTCTTACTACATTCAACTTCATTCTTATCAGGCACTACTCATTGTCCTTCAACCCCTGCACCTTCAAGAGAACCAATGGCTGCTTCAACTTCCAAAGCTTTCTTGGGAGATCATATCCATGTGGATGATATCGTTACAAGTTGCAGCAATGCACTAGACCTCGTCACGAAGCATACTGGTGTTTACTTCAAAGACAGAAGTCGTAAAGGTTGCCTGCGAGCTAGTGTGGATATTAGAAGGCCAGAACCGTTGAATGGTCCTCTAAGTTCTCGGTATTCCATTTTTTATGCTAATTGGGGGAAGCAGAACTATAACTTGCGTCATGGACCATGGCTGAAGAATATGTCTGTTACCTCTCCTGCTTTCTTCTCAGCCGGGGCTGCACAAGAAGTCTCATGTGATGGCAGCACTCCTGATGACCAACTTGCAAATTCTTCACTTTCTCCTGAGCAACCCATTGGAAGCGCGGGGACCTTGAAGCTGGTTTCAGGATCATGTTACCTACCTCATCCAGCTAAGGAGGACACGGGTGGAGAGGATGCTCATTTTATTTGCACAGAAAGACAAGCAATCGGCGTTGCAGATGGGGTAGGAGGCTGGGCGGATGTTGGTGTTAATGCGGGAATTTTTGCCCGTGAACTCATGTCTAATTCAGTCAGAGCAATTCAGGAGGAGCCACAAGGTCCTATCGATCCGTTGAGGGTGTTAGAGAGGGCTCACTCATGTACAAACGCCAAGGGCTCATCAACAGCTTGTATCATTGCCCTTAATGATAAGGGACTACATGCTATTAATCTGGGTGACAGTGGATTCGTTGTGATTAGAGATGGACGCACCATTTTCAAGTCCCATTTTCAACAGCATGGCTTCAATTTTACATATCAATTGGAAAGTGGCAATGGAGGCGATCTACCTAGCTCTGGCGAGGTTTATGCGATGCCTGTTGACCCGGGAGATGTTGTCATTGCTGGAACCGATGGACTATTTGACAACTTGTACTACAATGAGATTACTGCGATTGTTGTAGAGGCAGTACGGGATAGATTAGAACCCCAAATAGCTGCTCAGAAGATAGCAGCACTAGCTCGGCATAGGGCACAGGACCGGAATCGACAGACACCATTTTCGGCCGCTGCTCAAGAGGCTGGGTTCCGCTATCATGGTGGCAAGCTTGATGACATTACAGTTGTTGTATCCTACATAACAGAAATCAATTAG 1737 0.4519 MPIGSKWFNNYFTGDCAPSSSSLIETFFSKGKKKRQDLFERSSSASCLATKIRTLGREFQGDIPIPSEHTINFQKWNPRLDDQIEFTVIKPMTSSASAQSQKICTLRHYPVLFILHSTRVLPHFPIWNPLHKEKDGFLHSLSRNATFYYRILKAITGHQAVLGSLYRNSALSLFLLHSTSFLSGTTHCPSTPAPSREPMAASTSKAFLGDHIHVDDIVTSCSNALDLVTKHTGVYFKDRSRKGCLRASVDIRRPEPLNGPLSSRYSIFYANWGKQNYNLRHGPWLKNMSVTSPAFFSAGAAQEVSCDGSTPDDQLANSSLSPEQPIGSAGTLKLVSGSCYLPHPAKEDTGGEDAHFICTERQAIGVADGVGGWADVGVNAGIFARELMSNSVRAIQEEPQGPIDPLRVLERAHSCTNAKGSSTACIIALNDKGLHAINLGDSGFVVIRDGRTIFKSHFQQHGFNFTYQLESGNGGDLPSSGEVYAMPVDPGDVVIAGTDGLFDNLYYNEITAIVVEAVRDRLEPQIAAQKIAALARHRAQDRNRQTPFSAAAQEAGFRYHGGKLDDITVVVSYITEIN 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0183 578 PANTHER PROTEIN PHOSPHATASE 2C 308 576 IPR039123 -
Lele49g0183 578 SUPERFAMILY PP2C-like 340 571 IPR036457 -
Lele49g0183 578 CDD PP2Cc 351 571 IPR001932 -
Lele49g0183 578 ProSiteProfiles PPM-type phosphatase domain profile. 338 574 IPR001932 -
Lele49g0183 578 Gene3D - 477 577 IPR036457 -
Lele49g0183 578 SMART PP2C_SIG_2 334 574 IPR001932 -
Lele49g0183 578 Pfam Stage II sporulation protein E (SpoIIE) 361 572 IPR001932 -
Lele49g0183 578 FunFam 5-azacytidine resistance protein azr1 343 468 - -
Lele49g0183 578 SMART PP2C_4 325 572 IPR001932 -
Lele49g0183 578 Gene3D - 344 464 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0183 Lele-ChrLele49 1105729 1110925 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0183 49 1105729 1110925 Lele53g0065 53 507987 510883 CCT
Lele49g0183 49 1105729 1110925 Lele54g0067 54 549235 552359 CCT
Lele49g0183 49 1105729 1110925 Lele55g1432 55 20557656 20560563 CCT
Lele49g0183 49 1105729 1110925 Lele56g1364 56 16800036 16802914 CCT
Lele53g0068 53 527291 528737 Lele49g0183 49 1105729 1110925 CCT
Lele54g0069 54 567751 569204 Lele49g0183 49 1105729 1110925 CCT
Lele55g1429 55 20539376 20540845 Lele49g0183 49 1105729 1110925 CCT
Lele56g1362 56 16778111 16779582 Lele49g0183 49 1105729 1110925 CCT
Lele49g0183 49 1105729 1110925 Lele51g0200 51 1130663 1136197 hybridization
Lele49g0183 49 1105729 1110925 Lele52g0200 52 1194294 1200120 hybridization