Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0178 ATGGCAAAACGTTTCAAGTTTCGAATAGGCCGTGTCTTTCAGTCTTGCCGTTCCAAAGACCCTTCCACACTTCCCTCCAACCCTGTCCCCTGCTTCCTCCCACTCGCACCCCCTAAACCCCATTGCTCCTCCCTCCGCCGCCACGTCTCATATGCCTTTGAATCTGTCGGCTGTGGCTTCAGTTCAAGACCCACCCTCTCCGACGCCGATCACCACCGCAACGAACCCCAGGACTTCCACTGGGAACAACAAGACAAATGGCACGTCGTCGCCAAGGTATGCGCCCCCGAAAACAGCACGACACCTCGCAGTAAAATCTACAGCTCCTCTGTCTCCGCTGCCTCCGATGACGACGACGACGACCACGTCTTGCATCTCCCACCGCCGCCTCGCGTGAGGAAGAAGAAAGGACTGGTTAAGAAGAAGAGAACGACCCCGAGGTTTCGTATAAGCACCTCCTCCGCTGACAACTGTGGATTGGTTAGCAGCGATGGCTACGACGATATGGGCGAAGAAGAAACAGAAACCCTAGTTTCGTCTTCTAGAAGCTTCTCCACAGACTCTTCTTCCGTCGAGTTGAACTCTCCCTTGAAGAGCATTTGCGAGACGCCAAATCAGCACCAGGGAGTTAAGAAGATCAAGCCAAAATCGAAGAAGAAGAAGAGTAAGAAAAAGAAAGATGGAAGAGTGAGCTTTTCATCGTTGCCGGCGAGGTTGTCCATGTTATTGCAGCTGGCACCATGCAGCTTGGAGGGGAAGGTGAGGGAGAGCTTTGCGGTGGTGAAGAGATCGCAGGATCCGTACGAGGATTTCAGGAGGTCGATGATGGAGATGATTTTGGAAAAGCAGATTTTCGAGGACACGGATTTGGAGCAGCTCTTACATTGTTTCTTGTCTCTTAATTCCAGCGAACATCATGAGGTTATAGTCCAGGTGCTCGTTATGAGTCCAAATTCTGCCATCGATCACTTGATCTCTGGGAGCCAACTTGATGTCCAAGCCCAATGGCAGTATGAAATTGCTGTTCTTTCATCTTTCAAGCGTGTATTTGTCTGGGTACCCTTGCTAGCAACATATACTGGGTCGGAAAAGATGGAAGACAGCAGCGGGGTATACGGAAAATACAAGGGACGAATTGATGACCCAAGGATGTTATTCGACAACTCTGTTGAAGTAAATACATTGCGCAAAGTATGTTTTAAGGAAGTTCGAAGCTTGTCTGCCAGTGAATTCGATAGCATTGTAGGAGGCAAAAAGACCTAG 1263 0.498 MAKRFKFRIGRVFQSCRSKDPSTLPSNPVPCFLPLAPPKPHCSSLRRHVSYAFESVGCGFSSRPTLSDADHHRNEPQDFHWEQQDKWHVVAKVCAPENSTTPRSKIYSSSVSAASDDDDDDHVLHLPPPPRVRKKKGLVKKKRTTPRFRISTSSADNCGLVSSDGYDDMGEEETETLVSSSRSFSTDSSSVELNSPLKSICETPNQHQGVKKIKPKSKKKKSKKKKDGRVSFSSLPARLSMLLQLAPCSLEGKVRESFAVVKRSQDPYEDFRRSMMEMILEKQIFEDTDLEQLLHCFLSLNSSEHHEVIVQVLVMSPNSAIDHLISGSQLDVQAQWQYEIAVLSSFKRVFVWVPLLATYTGSEKMEDSSGVYGKYKGRIDDPRMLFDNSVEVNTLRKVCFKEVRSLSASEFDSIVGGKKT 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0178 420 ProSiteProfiles OVATE domain profile. 260 319 IPR006458 -
Lele49g0178 420 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 258 313 IPR006458 -
Lele49g0178 420 MobiDBLite consensus disorder prediction 99 113 - -
Lele49g0178 420 MobiDBLite consensus disorder prediction 99 145 - -
Lele49g0178 420 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 109 312 IPR038933 GO:0045892
Lele49g0178 420 MobiDBLite consensus disorder prediction 161 230 - -
Lele49g0178 420 MobiDBLite consensus disorder prediction 176 206 - -
Lele49g0178 420 MobiDBLite consensus disorder prediction 129 145 - -
Lele49g0178 420 Pfam Transcriptional repressor, ovate 264 312 IPR006458 -
Lele49g0178 420 MobiDBLite consensus disorder prediction 211 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0178 Lele-ChrLele49 1076498 1079660 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele49g0178 Ovate 5.1e-21 No_clan