Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0170 ATGGATAACCAAGATTACATGGAATCTAATACTGAAGATTTTTATGCTCAGGACTCTCAAGAGGAGTTCAGTTTACCATCTGATCAGTTTCCTGAATCTTCACATAAGAGGGAATCACGGAAAACAACACATGAAAGTTTTAACCCTGAGCTTAAGAAATACTTGACCATTGAAGATGTCGTGTGGGAGCTTGTTCTTCCATTTGTTCCTGCAAAATCACTCTGCAGGTTCAAAGCTGTCTGTAAGAAGTGGAACCGATGGATAAATAGTTCTTTCCTTGCTTTCCAACAGAGCTACTACTTCCAGAAAACATGTGGTTTCTTGTATCAGTGCCCTGATACTTACCCTGTCTTCATCTCTTTGGATTCATCCGCTTATGGCGTTGCTTGCCCCTCTCTCAATTTCTTGCCTGAACATTTTACTGTAAGGGCCACATGCAACGGTCTGATTTGCTGCCGAGCTACTTCTGGGGACAACAACTACTACATCTGCAACCCTACTAGCAAGCAATGGCATGCGATTCCTGAGCCAAATCTTTACCATGGACCCGAATCAGCTTCGGTGCTTGTCTATGAACAATCGCTCTTAAACTTCAGGGCAAGTTATGATCTCGTTTGTGCTGTTCCTATGATCAACGAACCTGTTATTCGCTTTGAGATCTTCTCATCAAGGTCCAGGACTTGGAGGGTTGTGGAAACAGCAGTGTGCTCTGAACTGAAGAGCACGATATTAAGTGGAGATGGAATTTACTTGAAGGGATATGCCTACTGGGAGACTTACTCTGGTGAAGTTCTGGCCTTTGATATGAATTTTGAACTGCTTAGCATTTTCCCTCGTCCTGCTAACAGAGGACCACAAGGTGTTTTAACTGGATGTCGTGGGGAATTATGCTATCTGATGCCTTATAGGATGGAGAATGATGAATGCTTGATCGAAGTTTATGGAGGTATGGGTATGACTCTGAAGGATGAAATTTCGTTCCCTGTTGGAAATTTGGTGATAGATGAAGATGAATGTTTCCGTGCCTTGCCCTGTTTAAGTGGAGACAAATTCGTAGTTATTGTTGGGTGGAATCTGGTGGTCTATGATGCCAAAGAGAGAAGCGCAGAATCTTTGGACATTGGAAGCATTTATGGCGGAGTAAAATTTCTGCCTTATGTGAACAACCTTGTACCTGTGACCCATCACCAGATGTACAGCGAGCTCTTGGATGTCTCATCTGAGACTATCTTAAAGTTGTTTAATGTAGTTGTTCTGAACAATGTGTGGTGCCCATTTTCTGTCTGCTATCCGGTGGCAGATTTTGGCTTGTCTAAGGCTCGACCACTACTACATCGAGGAATGGAAAATGGAAACTTCAGAGAGTTAGTGGATGCATTTTTAGAAAGAAGGTATGATAATCAACAAGTTGCTCGCATGGCTGCTTGTGCTGCGGCCAGTATTCGCCATTCTCCTAAAAAACGTCCAAGTATGAGACAGATTCTATTGGCTTTGGAAGGCGATGCATCAACGGAGGATTTGATCGATGCGGGTATTCCCCCTCATGATTTTCATTAG 1557 0.431 MDNQDYMESNTEDFYAQDSQEEFSLPSDQFPESSHKRESRKTTHESFNPELKKYLTIEDVVWELVLPFVPAKSLCRFKAVCKKWNRWINSSFLAFQQSYYFQKTCGFLYQCPDTYPVFISLDSSAYGVACPSLNFLPEHFTVRATCNGLICCRATSGDNNYYICNPTSKQWHAIPEPNLYHGPESASVLVYEQSLLNFRASYDLVCAVPMINEPVIRFEIFSSRSRTWRVVETAVCSELKSTILSGDGIYLKGYAYWETYSGEVLAFDMNFELLSIFPRPANRGPQGVLTGCRGELCYLMPYRMENDECLIEVYGGMGMTLKDEISFPVGNLVIDEDECFRALPCLSGDKFVVIVGWNLVVYDAKERSAESLDIGSIYGGVKFLPYVNNLVPVTHHQMYSELLDVSSETILKLFNVVVLNNVWCPFSVCYPVADFGLSKARPLLHRGMENGNFRELVDAFLERRYDNQQVARMAACAAASIRHSPKKRPSMRQILLALEGDASTEDLIDAGIPPHDFH 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0170 518 Pfam F-box domain 24 90 IPR001810 GO:0005515
Lele49g0170 518 SUPERFAMILY F-box domain 61 94 IPR036047 GO:0005515
Lele49g0170 518 MobiDBLite consensus disorder prediction 1 30 - -
Lele49g0170 518 MobiDBLite consensus disorder prediction 1 44 - -
Lele49g0170 518 TIGRFAM F_box_assoc_1: F-box protein interaction domain 145 301 IPR017451 -
Lele49g0170 518 Gene3D - 42 93 - -
Lele49g0170 518 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED 58 367 - -
Lele49g0170 518 Gene3D Transferase(Phosphotransferase) domain 1 426 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0170 Lele-ChrLele49 1040218 1045395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0170 414 510 Trihelix Transcription Factor Family AT1G70460 40.000 2.76e-13 70.5