Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0160 ATGGGCGACGCTACACCTATGGACTCTATGGACTTGAAGGTGAGAGAGCTATTGAAGGAAGTACAACTAGATTATTCTCCTCCATTCACCAAGTTCGTTGATGACGCTGTCTCCGCCATCAAAGCATCCATCAATAAGATCCCGGAAGACGTTAAGGTGACGGCTGATATAGCTCCATATTTTGTAAGGGACACTGGCGCGGATAAAGTTGAGTTCAAGTTCAAGAAGCCAACATCTATCAAAGTCGGGGGCAGTTATGCCACGCAAACTCTTGCAAAGCCTGAAGTAAATGTAGACCTTATCATAAGGTTGCCTAAGGAGAGTTTCCACGAGAAAGATTACTTAAATTATAGATACCATGCCAAGAGATGCCTGTATCTTTGCTTGCTGAAAAAGTATTTGGATACTTCTACATCTTTTGATAAGGTTGAATGGTCTACACTGCAAAATGAAGCCCGGAAACCTATACTAATTCTTCATCCAGCTGTAAAGCTTGCTGAAGTTCCTGGTGTTTGTATAAGAATAATTCCATCAGCAATGTCTTTATTTGGCATATCAAGGTTGAACCTGAATCGTAACAACATTCATACTCCTGATCAAGGGACAGGTCTTGAGGCTACACCAAGTTACAATAGTAGTATTCTGGAAGATATGTTTTTAGAGGATACCGAATTTATTGATAAAAGTTTTTCTAGATGGAAGGAACTAAGAGAAGCTTCAACTTTGCTAAAGGTTTGGGCGCAACAGAGAAGTTCAATATATGTTTATGATTGCCTGAGTGGATTTTTGATCTCTGCAATTCTGGCATACCTTCTGACAAGGCAGCAAATCAGCACATCGATGAAGGCACTCCAAATATTTCGTGTTACCATGAACTTTATTGCCAATTCAGAGTTGTGGAGCCGTGGGCTTTATTTTCCTCAGGAAGGCCAGAGTAACATTACAAAAGAGGAAAGGCTTCAATTTAAAAAGTCTTTTCCAGTTGTTATTTGCAATCCATCTGGAAGATTCAATTTGGCTTTCCGGATGTCTAGAGTTGGTTTTGCTGAGCTTCGAGATGAGGCTGCTTTGACACTTAAATGCTTGGAGAAGTGTAGAGATGGTGGATTTGAGGAAATTTTTATGACTAAGATTGACTATGCTGCTAAATACGACTACTGCATAAGAATAAATTTAAAGGGAAAGAAGGAGGTACATGCATTGGGATTTTGTTCAGACGATGAATGTTGGAGATTGTATGAGGAGAAAGTACATGGTATTCTCACTAAAGGGTTGAATGATAGAGCAAAGTGCATTCGTGTTACCTGGAGAAATGCGCAGTCACCATGGAGTGTAGATGATGGCTTGTCTGCACTTGATAGAGAACCACTACTTATTGGAATTTCAGTGAGTAATTTGGAGAAAGCATTCAGGATTGTTGATATTGGCCCAAATGCTGAAAATAGTGAAGAGGCGCTAGAATTTCGGAAATTTTGGGGGGAAAAAGCTGAGCTTAGGCGATTTAAAGACGGTAGAATTGCAGAAAGCACAGTCTGGGAAAGTTATAAGTGGACAAGACATCTTATTTTAAAAAGAATAGTGGAGCATATACTCAGTCGACATCTCTCTCTGTTGAAAGAAAATATTGTAGTTGCTGTGGATCAACTTGATTTCTCTTTGCTACATGGAGCTGGCGATCCAATATCACATTCTGAGAGTTTGCTTAAGGCATTTGATGTCTTATCGAAGCGTTTGCGTCTAGTTCCAGACATCCCTTTGAAGGTGTCCAGTGTACAACCTTTAAACTCTGCTTTCAGGTCTACATCAGTCTTCCCTCCTGAACCTCATCTTTTGGCTAATGAAAACATTGAGTCTGTTAAATTGAATAGTGCCATTCCTTCGTGCATTCAACCCTTGGAAGTTATGATTCAGCTGGAAGGTTCTGGTAACTGGCCAATGGATGAAGTTGCAGTGGAAAAGACAAAATCTGCCTTCCTTCTTCAGATTGGAGAGAGTCTTCAAAAACTATGGGGAATGGCATGTATTGCGACTGAGGATAACGTAGATGTATTATTATCTGGATATGCATTTCGTCTAAAAATTTTGCATGAGAGGGGTCTCAGTTTGCTCAGCAAGGAAAGTGAGAATGGTCAAGCAAAGCGTGTTTCTACGATGGACAAGAAACTTTTCATCTGTAATCAGCATTCTAGCATGATTAATGGATTACAAAGCTGCTACCCAATATATGGATCAGTAGCTAGACTTGCAAAACGATGGGCTGCTTCACATCTATTTTCAGCTTGCTTGGTAGAAGAAGCAGTTGAGCTTTTGGTTGCTTATGTCTTTCTTAATCCTTTGCCATTTAACACTCCTTGCTCAAGGATAACTGGATTTTTAAGATTCCTGCGGTTACTCTCAGAGTATGACTGGACATTCTCCTCATTGGTTGTGGACATAAATAATGACTTAAGCCAAAGTGATAAGAAAGAAATAACTGATAACTTTATGTTAAGCAGAAAGGTTCAGGGAGAGAATGGACTAAGGCCAGCTCTGTTTATAGCTACAGTGTATGATAAAGCATCTGAGGCTTGGACTGGATCATCACCAAGTGCATTGGAACTTAAACGGTTGGTGGCTTATGCCCGTAGTAGTGCAAACTTGTTGACGAAACTTATATTTCAGGATCACATTGGTCCATACAGATGGGAGTGTCTTTTCCGAACTCCTTTGAACACTTATGATGCCATAGTTCTTCTTCACAGAGATAAACTCCCTTATCCTCAAAGACTTCTCTTCCCGTCAGAAGTTGGTCATGGAAAACATATTGCTAGAGGACATGCTAGCAAGTGTTTCCAACCTGTGCTTTTGCCAGGAGATTTGAAGGGGAGGTCTGATGAAGTTAAAAGCAAGTTGCTGGTTGACTTTGATCCATTAAGGTGCTTCATCAGGGATTTGGAGAAAGAGTTCTCCACCACGTTCAAGGTATGGTACGATTTGTTGGGAGGTGATGCTATTGGCCTAACGTGGGGTGGAAGTTATTCTTCAAAGAAACGGAAGCAAGAGGAAGTAGTTGAGGAGCAGGGACATGACCCAAGCAAGTTGCTGAAATCAGTAGGTGATGCTGGGAAAGGGTTTGTGAAGAGTGTTTACTTTCTCAAGCCACAAGGCCCTCAAATTAAGCGGTGTTAA 3168 0.4075 MGDATPMDSMDLKVRELLKEVQLDYSPPFTKFVDDAVSAIKASINKIPEDVKVTADIAPYFVRDTGADKVEFKFKKPTSIKVGGSYATQTLAKPEVNVDLIIRLPKESFHEKDYLNYRYHAKRCLYLCLLKKYLDTSTSFDKVEWSTLQNEARKPILILHPAVKLAEVPGVCIRIIPSAMSLFGISRLNLNRNNIHTPDQGTGLEATPSYNSSILEDMFLEDTEFIDKSFSRWKELREASTLLKVWAQQRSSIYVYDCLSGFLISAILAYLLTRQQISTSMKALQIFRVTMNFIANSELWSRGLYFPQEGQSNITKEERLQFKKSFPVVICNPSGRFNLAFRMSRVGFAELRDEAALTLKCLEKCRDGGFEEIFMTKIDYAAKYDYCIRINLKGKKEVHALGFCSDDECWRLYEEKVHGILTKGLNDRAKCIRVTWRNAQSPWSVDDGLSALDREPLLIGISVSNLEKAFRIVDIGPNAENSEEALEFRKFWGEKAELRRFKDGRIAESTVWESYKWTRHLILKRIVEHILSRHLSLLKENIVVAVDQLDFSLLHGAGDPISHSESLLKAFDVLSKRLRLVPDIPLKVSSVQPLNSAFRSTSVFPPEPHLLANENIESVKLNSAIPSCIQPLEVMIQLEGSGNWPMDEVAVEKTKSAFLLQIGESLQKLWGMACIATEDNVDVLLSGYAFRLKILHERGLSLLSKESENGQAKRVSTMDKKLFICNQHSSMINGLQSCYPIYGSVARLAKRWAASHLFSACLVEEAVELLVAYVFLNPLPFNTPCSRITGFLRFLRLLSEYDWTFSSLVVDINNDLSQSDKKEITDNFMLSRKVQGENGLRPALFIATVYDKASEAWTGSSPSALELKRLVAYARSSANLLTKLIFQDHIGPYRWECLFRTPLNTYDAIVLLHRDKLPYPQRLLFPSEVGHGKHIARGHASKCFQPVLLPGDLKGRSDEVKSKLLVDFDPLRCFIRDLEKEFSTTFKVWYDLLGGDAIGLTWGGSYSSKKRKQEEVVEEQGHDPSKLLKSVGDAGKGFVKSVYFLKPQGPQIKRC 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0160 1055 Pfam Nrap protein domain 1 98 222 IPR035082 -
Lele49g0160 1055 Pfam Nrap protein nucleotidyltransferase domain 4 562 736 IPR035369 -
Lele49g0160 1055 Pfam Nrap protein PAP/OAS-like domain 236 377 IPR035367 -
Lele49g0160 1055 Pfam Nrap protein domain 3 382 536 IPR035368 -
Lele49g0160 1055 Gene3D - 209 380 - -
Lele49g0160 1055 FunFam Nucleolar protein 6 210 380 - -
Lele49g0160 1055 Pfam Nrap protein PAP/OAS1-like domain 5 739 888 IPR035370 -
Lele49g0160 1055 PANTHER NUCLEOLAR RNA-ASSOCIATED PROTEIN 8 1043 IPR005554 -
Lele49g0160 1055 Pfam Nrap protein domain 6 903 1042 IPR035371 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0160 Lele-ChrLele49 959334 967794 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0160 49 959334 967794 Lele51g0173 51 991765 1000252 hybridization
Lele49g0160 49 959334 967794 Lele52g0176 52 1048549 1059126 hybridization