Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0154 ATGGAACTGATGAAAGGTTTAGATAAGGAAATAGAGATGCCATTACCAACCACTTCAGGTTATAATCCCTCCAATAGGGACTCTTCTTCTCCAACTCTAGCTTCAACAGCAGGCGAAACAAGTAGTGATCAACCTCCTCAAACTTCTGATCAGTATCATCTTCATCAGCCTGTTCCTTCTCTGCCATCGAACCCACTTCAGCAATCGGAGAGAAACGCAAGAGATCCAGATCCGCCAAGCGTAACAGCGATCACACCGATTGCTGGCAGGTCAAACCCAAGACCAGCAACAGCGAAGTCAATTAGGTACAGAGAATGCTTGAAGAATCATGCGGCGAGCATGGGAGTATACGTCATGGATGGGTGCGGCGAGTTCATGCCAAGCGGAGAAGAAGGAACTCCACAATCATTGAGATGTGCTGCTTGTGACTGCCACCGGAATTTTCACCGGAAAGAGACCGAAGCTGAACCTCAAACTAATGTTCTCAATTACTACACCTACCCTCCCAGTAAAAGCAATAACGCACAAAGTAGGATTCTTTCTCCTCAGTTTCCGCCACACCCTCCTTCTCTACATCATCATCATCATCATCATCAACAGCATATGAGATTTTCAGGAGGGTCGTTCCCGCCGTTGATGATGGCCTTCGGCGGCGGTGGGGCGGCGGAGTCTTCTAGCGAAGATCTGAACATGTTTCAGTGTAATGATGCGGGAGGGCAAGGGTCACTGCAGGCGGCAGCGTCATCGAGGAAGAGGCTTAGGACCAAGTTTAGCCAGGAGCAGAAGGATAGTATGATGGAGTTCGCCGAGAAGTTGGGATGGAGGATCCAGAAACATGACGAGCAAGAACTACAGCAGTTTTGTAATCAAGTATGTGTGAAACGGCAGGTTTTCAAGGTTTGGATGCACAATAACAAGCAGGCCTTGAAGAAGAAGCAAATAAACTACAATCTGGACTCTAGAGGGAGAAAACCAAGAGAAAGAGCAAGATTAGGGTTGTACGTAGGGATCGATGTAGCCATTACTGGAGCTAGCGATTCTTAG 1044 0.477 MELMKGLDKEIEMPLPTTSGYNPSNRDSSSPTLASTAGETSSDQPPQTSDQYHLHQPVPSLPSNPLQQSERNARDPDPPSVTAITPIAGRSNPRPATAKSIRYRECLKNHAASMGVYVMDGCGEFMPSGEEGTPQSLRCAACDCHRNFHRKETEAEPQTNVLNYYTYPPSKSNNAQSRILSPQFPPHPPSLHHHHHHHQQHMRFSGGSFPPLMMAFGGGGAAESSSEDLNMFQCNDAGGQGSLQAAASSRKRLRTKFSQEQKDSMMEFAEKLGWRIQKHDEQELQQFCNQVCVKRQVFKVWMHNNKQALKKKQINYNLDSRGRKPRERARLGLYVGIDVAITGASDS 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0154 347 MobiDBLite consensus disorder prediction 183 203 - -
Lele49g0154 347 SUPERFAMILY Homeodomain-like 240 311 IPR009057 -
Lele49g0154 347 MobiDBLite consensus disorder prediction 1 97 - -
Lele49g0154 347 Gene3D - 237 311 - -
Lele49g0154 347 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 103 152 IPR006456 -
Lele49g0154 347 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 250 307 IPR006455 -
Lele49g0154 347 MobiDBLite consensus disorder prediction 17 75 - -
Lele49g0154 347 Pfam ZF-HD protein dimerisation region 101 153 IPR006456 -
Lele49g0154 347 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 77 308 - -
Lele49g0154 347 FunFam Zinc-finger homeodomain protein 2 238 311 - -
Lele49g0154 347 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 102 152 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0154 Lele-ChrLele49 922326 923665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0154 45 314 ZF-HD Transcription Factor Family AT2G18350 44.526 2.31e-64 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lele49g0154 ZF-HD_dimer 2.5e-30 No_clan