Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0149 ATGATCATCAGTGCTAACGACGATTCTCACTGTCATCAACCTCATGCACACAAAGATGGTGCAGATTCAATGCTTTTGTCTCAGTTCCCCTCCCTTCAATGGGATTGCCAAGCTTCTTGTTCTTTGTCGGCTGAGGATTTCTCTGAATCAGTCATCGAATTTCTGAAGAATGCATATGACCTGCAAGACATAAAGGCTCTGAGAGCGGGAATGCAGCTGTTCTTAGAATTTATAAACAAGCACAGAACTAAAATTGCAGCATCCAGCGCATTTTCTTCCATTTTAAAGATTCTTGACTCCGAGAGCAGAGAGCTTCAACAACAATCCATTCGAATAATTTACAATTTGTCGTTCAACAGTGAAGCTTGTTACCACATGGTAACTCTCCAGTGCATAATCCCAGGATTGCTGCCATTTTTCGAAGACGGGACTTCGTTAAGATACTGCATATGCATATTGAAAAACCTTTGTGATACAGAAGAGGGTAGGGTTTCTGTTGCTAAAACAGAAGGATGCATATCTGCTATTGTTGAAATGCTTGAGGCTGACAGTGAAGAAGAAGAAGAACATGCACTGGCTGTCTTACTCTCTGTATGCTCTGAGTTTGGATTATTGTCAGCTGGTCATGAAACAAAGGGAATGGTTTATCCCTTCCCTTTTCTTTATTGCCAGAAATGGCAAAGAAGGAAAGGCGAGTGCATTGCAGTTGCTCTGACTTTTGACGGATACTCCAATATAGAGCTTAAAGATAAAGAAAGAAAAGAAAGAAGAAACCTCATCGGTTTTATTTGA 792 0.4066 MIISANDDSHCHQPHAHKDGADSMLLSQFPSLQWDCQASCSLSAEDFSESVIEFLKNAYDLQDIKALRAGMQLFLEFINKHRTKIAASSAFSSILKILDSESRELQQQSIRIIYNLSFNSEACYHMVTLQCIIPGLLPFFEDGTSLRYCICILKNLCDTEEGRVSVAKTEGCISAIVEMLEADSEEEEEHALAVLLSVCSEFGLLSAGHETKGMVYPFPFLYCQKWQRRKGECIAVALTFDGYSNIELKDKERKERRNLIGFI 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0149 263 PANTHER U BOX DOMAIN-CONTAINING 71 212 - -
Lele49g0149 263 Gene3D - 37 213 IPR011989 -
Lele49g0149 263 SUPERFAMILY ARM repeat 47 199 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0149 Lele-ChrLele49 897070 899292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0149 41 199 U-box Gene Family AT4G36550 30.198 3.75e-19 85.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0149 49 897070 899292 Lele53g0047 53 366582 371463 CCT
Lele49g0149 49 897070 899292 Lele54g0046 54 400435 404068 CCT
Lele49g0149 49 897070 899292 Lele55g1451 55 20707424 20710931 CCT
Lele49g0149 49 897070 899292 Lele56g1383 56 16947839 16951443 CCT
Lele49g0149 49 897070 899292 Lele52g0168 52 990669 994237 hybridization