Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0143 ATGTCAATAATCCCACTTGCTGTGAAACGTATCGTCTTCGATGACCGAGAAAAGCAAGATCCTGATCGATGGAGCCGAATGAGGTTCCTTCCCTCGGAGTTTGGGCTAGATGTGGATCGTCACCATGTAGCTGAGCCATCTGGTAGTGTTTTGAATCGCAAAGTGGACATCAGAAGGAAAGTTGAAGCCGAAGGGATACCCTACACTTTTGTGGTAAGCACCGCCTTCGCTGGCTATTTCTTGCCAACTTTGGGACAGCAGAACGTCACCGCTCCTCCTATTGACAAGGTTTCCATCATGGGAGATGGGAATGTCAAAGGGGATGAGATTCTGAAGAAAATCCCAGAGAGTCCTACTCCGATTAACTACATGTTGGGGGTGGGTCATGCCATGCATGTGGAAGGAGACTGCACTAACTATGAGATCGATCCATCTATTGGAGTGGAAGCTACAGAGCTTTACCCAGATGTTGAATACACCAGCGTTGACCAGTATTTGAACAAGCAAGGGAAGGCGAAATCATTCTCTCCAAGGAGTTTCCTTTCGAAACCATCGCGTAATTCCAGATTCGACTATATGGAGAACTTGCCACAGAATGAAAAGCTTCCTCCTCGGACTCCGAATTCCAGATTCTCGGCGAAGGAGGGAAGAAGTGGGTATGAACCATCAGACACAGAGACAGAGTGGCAAGAAGTTCCCCGACATGAACGAGAAAGAAAGAATCTGACCTTGGGACCTGAAGAGGTAAAATTCCTTAACTTCAGGAATAATAAAAGTCCCATGGCACTACACAGAAGGCATCCTTCAATATTTGAACTAGAAATCTCATCTCCTGCTCTGTCTACAGCAGCAAGCTCAGCACGAAGGAGACGCCAAATTAGATCGCCGTATAGGCCCTTCAGAGCGGACTGTGAGGCTCTACATCCCATAACAGGTTTGACAAATCCTGAGCTTGGAAGGCATGCATCTCCATATCAACTTGAAAGAGAAAATCTCGATTGGAGAGCGGTGAACAGAGTAGGTAAGAAACCAAACCAGTGGAGAGTAATGACTACTCCGAGGGGTGATATTTTTTTTTCTCGTGAATACAATGCCATGATGAAGACCACGACCTTCTTAACAAAGCCAAACATTGGTGTTGAAACCCAGTCTAATAGCTCGCCTAAGCTCCTTCCCCAAGTAGGCACCCCTTATAATCGTCCCCATCCAAACAGAGCAAATGGTAATCTCAATAATGTGAACTTACGAGGTACGCCATCTAGTACTACTATGCTGTCTCGATCAGGACACATTGGTTCAGGAAAAAGAGTGCTAGCAATGGCTCTTCTGCGAGAAATATTTGGTGACGCAACGTCGAATATATCTCATGATTTAAGAAATTTCACCATCCAGGCACAGATTTCTGACCTAGTACTATTGCATCTTCAAATCCAAGCACCCATATTATCATACATTGACAGGAAAGGAGGCCCTAATTTGAATTTCAAGTCAGATTACAAAGTTTGTTGCGAAGATGATGCCGACATTCTCGAACCTGGGCAAAACCAGTTCAAAGTTATTGATATTGATGCTCCGCCAACTCATGAAATTATGGATGTTCCTATTCAGATAGCAAGACAAGAAGAAATTGATCTGTCCATGAACTTTGCTGCTAAGATTGCCACCAAGTCAAAGCAGAATCTCAGGAAAGCAATCATGGCTCTTGGAGCATGCAGATCACAAAAGTGA 1728 0.4468 MSIIPLAVKRIVFDDREKQDPDRWSRMRFLPSEFGLDVDRHHVAEPSGSVLNRKVDIRRKVEAEGIPYTFVVSTAFAGYFLPTLGQQNVTAPPIDKVSIMGDGNVKGDEILKKIPESPTPINYMLGVGHAMHVEGDCTNYEIDPSIGVEATELYPDVEYTSVDQYLNKQGKAKSFSPRSFLSKPSRNSRFDYMENLPQNEKLPPRTPNSRFSAKEGRSGYEPSDTETEWQEVPRHERERKNLTLGPEEVKFLNFRNNKSPMALHRRHPSIFELEISSPALSTAASSARRRRQIRSPYRPFRADCEALHPITGLTNPELGRHASPYQLERENLDWRAVNRVGKKPNQWRVMTTPRGDIFFSREYNAMMKTTTFLTKPNIGVETQSNSSPKLLPQVGTPYNRPHPNRANGNLNNVNLRGTPSSTTMLSRSGHIGSGKRVLAMALLREIFGDATSNISHDLRNFTIQAQISDLVLLHLQIQAPILSYIDRKGGPNLNFKSDYKVCCEDDADILEPGQNQFKVIDIDAPPTHEIMDVPIQIARQEEIDLSMNFAAKIATKSKQNLRKAIMALGACRSQK 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0143 575 MobiDBLite consensus disorder prediction 217 236 - -
Lele49g0143 575 MobiDBLite consensus disorder prediction 195 236 - -
Lele49g0143 575 PANTHER PINORESINOL REDUCTASE-RELATED 28 106 - -
Lele49g0143 575 Gene3D - 107 166 - -
Lele49g0143 575 Pfam NmrA-like family 28 108 IPR008030 -
Lele49g0143 575 Gene3D - 141 154 - -
Lele49g0143 575 Gene3D - 73 106 - -
Lele49g0143 575 Gene3D - 28 72 - -
Lele49g0143 575 Gene3D - 527 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0143 Lele-ChrLele49 875178 880248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0143 432 574 Core DNA Replication Machinery Family AT5G27740 26.667 3.02e-10 60.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0143 49 875178 880248 Lele51g0158 51 913826 914879 hybridization
Lele49g0143 49 875178 880248 Lele52g0162 52 970200 975103 hybridization