Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0131 ATGTTTTCCGCCAGAGACATGCCTTCTCCATCCTCAATTTTCTCGGCTTATGCCTCCATGACCGCCTCCGTCATGCTGTTTCGTTCCATGGCCAACGACCTCATACCTCATCCTCTTCGAGGTTATCTTCTTAATGCTTTCCGCTATTTCTACAAGCCTTACTCCCCTGTTCTCACTCTCCTCATAGAAGAATCCAGCGGAATTTCTCGCAACCAAGTCTACGATGCTGCAGAAGTTTACTTATCCGCCAAAGTCAGTCCCCAAAACGACAGGCTCAAGATCAGCAAGAGTCCCAAAGAGAAGAACTTGATGGTTCGCCTTGTAAAGGGTGAGAAGCTGGAGGATTGGTATAATGGGGTGGAGCTCAAGTGGAGATTCAACTCTTTAGAGCCAGAGAACAGCCACCACAGTGATCCACACTTGTCAGGTAGATCGGAAAGGCGATACTTCGAGTTGAGTTTCCACAAGAAGCACAAGGAGATGATATTAAATTCTTACCTTCCGTTGGTACTCGAAAAAGCCAAGGTCATAAGAGATGAGGAAAGGATACTGAAGATGCATACTTTAAACACCTCCTACGGTTATCCGGTGGTCAAGTGGGATTCTGTGAACCTCGAACACCCATCGACCTTTGAGACTCTGGCTATGAACCCAGAGCTGAAGAATGCTCTGATGGAGGACCTAAATAGGTTCGTCAAGAGGAAGGACTTTTACAAGAAAGTTGGGAGGGCGTGGAAACGAGGGTACTTGCTGTATGGGCCCCCGGGTACTGGGAAATCAAGCTTGATTGCAGCCATGGCTAATTACTTGAAGTTTGATATCTTCGACCTTCAACTTGAAAATATCAGGAGAGATTCGGACCTCAGAAAGCTGCTTCTGGCCACTGCTAATAGGTCCATTCTCGTGATCGAAGACATTGATTGCAGCGTGGATCTGCCGGGGCGGCGCCAAGGAGAAGGACATAATAATAATTATAACAAGACTGCTAAGAATAAGAACGCTGACGCATGGCAGCTGACGTTGTCTGGGTTACTGAACTTCATAGATGGGCTCTGGTCAAGTTGTGGAGACGAGAGGATTATAGTGTTCACCACCAACCACAAGGAAAGGCTAGACCCGGCCCTTTTACGCCCAGGGAGAATGGACATGCACATTCACATGTCCTACTGCTCATACCATGGCTTCAAGCTTTTGGCCTCAAATTATTTGGGAATTTCCAGTGACCAGCACCAGAATCTGTTTACAGAAATAGAAGGCCTCATAGAGGACACTCACATAACCCCTGCTCAAGTGGCAGAGGAGCTCATGAAGAGTGAAGACGCTAAAGAAGCGCTTGAAGGCTTCGTGACTCTGCTTAAGCGGAAGAAGATGGAAGGCGACGTGTCTGAGAATGATGAATCAGAGAAACCATTGTTTCGAGGAACAAAACGGAGAAGAGTTAATTGCAAACAGGGGAAAACTGTGGGGGTCGGCAAGAGGAATAGTGGGAGTAGTACCCCAAGAAGGACAAGAAGAGGAACTATCTCGTAA 1530 0.4719 MFSARDMPSPSSIFSAYASMTASVMLFRSMANDLIPHPLRGYLLNAFRYFYKPYSPVLTLLIEESSGISRNQVYDAAEVYLSAKVSPQNDRLKISKSPKEKNLMVRLVKGEKLEDWYNGVELKWRFNSLEPENSHHSDPHLSGRSERRYFELSFHKKHKEMILNSYLPLVLEKAKVIRDEERILKMHTLNTSYGYPVVKWDSVNLEHPSTFETLAMNPELKNALMEDLNRFVKRKDFYKKVGRAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIFDLQLENIRRDSDLRKLLLATANRSILVIEDIDCSVDLPGRRQGEGHNNNYNKTAKNKNADAWQLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCSYHGFKLLASNYLGISSDQHQNLFTEIEGLIEDTHITPAQVAEELMKSEDAKEALEGFVTLLKRKKMEGDVSENDESEKPLFRGTKRRRVNCKQGKTVGVGKRNSGSSTPRRTRRGTIS 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0131 509 SMART AAA_5 245 391 IPR003593 -
Lele49g0131 509 ProSitePatterns AAA-protein family signature. 359 377 IPR003960 GO:0005524|GO:0016887
Lele49g0131 509 MobiDBLite consensus disorder prediction 457 509 - -
Lele49g0131 509 Pfam ATPase family associated with various cellular activities (AAA) 250 388 IPR003959 GO:0005524|GO:0016887
Lele49g0131 509 CDD AAA 246 389 - -
Lele49g0131 509 PANTHER BCS1 AAA-TYPE ATPASE 15 457 - -
Lele49g0131 509 MobiDBLite consensus disorder prediction 457 475 - -
Lele49g0131 509 Gene3D - 198 385 IPR027417 -
Lele49g0131 509 Gene3D - 386 459 - -
Lele49g0131 509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 440 IPR027417 -
Lele49g0131 509 FunFam AAA-ATPase ASD, mitochondrial 201 385 - -
Lele49g0131 509 Pfam Domain associated at C-terminal with AAA 35 126 IPR025753 -
Lele49g0131 509 MobiDBLite consensus disorder prediction 488 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0131 Lele-ChrLele49 812139 814233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0131 203 387 Calmodulin-binding Proteins AT3G56690 27.835 5.70e-12 66.6