Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0124 ATGGCGGGTTTATTCTCACTAGGCGGTGGAGGTGGTGGTGGAGGAGGGAGGGGAGGAGGTGGGAGCAACCAGGACGACGAACCCCACCACCACAATAACCCACCCACGGGAGTTCCTCATCCAGACGCCTTATTTTGGTACAAGAGTAATGAAGACGTATCTTGTTACAGAGGCTTCGAGCTGTGGAACCAGCAGCAGCACCAGGTCATGCCTCCTCAAGCGAGGCCACTTCTCCCCCAAGATCTTTACTCGCTAGGGGTGGGGCCGAGCAGCAGGAGCTCCGATGATCACTCCTCGTCAAGATCGGGCGTCATGATGATGCGTTCCGGCGGAGGAAGCGGCGGCGGCGGCGGAGGAATAAGCTGCCAAGACTGTGGGAACCAAGCGAAAAAGGACTGCCCGCACATGCGGTGCAGGACTTGCTGTAAGAGCCGTGGCTACGACTGCCATACACATGTGAGGAGCACTTGGGTTCCGGCCGCCAAGCGACGCGAGCGACAGCAGCAACAACAGCAGCAGCAACTTCAGCTTGGAGCAGGAGACAACAATCCCAAGAGGCTGAGAGATACTTGTAATAATAACCCCAGCCCCTCCACTCATGTGCAAATGCCAACCCACTCTTCATCAGCAGAAGGGTTAGAGCATGGGAATCTTCCAGCAGTGTTAAGTTCCTCGGCGGAGTTCCGGTGCGTACGGGTTAGCTCCATGGACGAGGCTGACGAACAATACGCGTATCAGACGGCTGTGAACATCGGAGGCCATGTATTCAGAGGAATTCTCTATGACCAAGGCCCCGATCCCATTTACATGTCCACCTCTGATACTTCTCCCGGTGGAGCCGTTCAGCCCCTCAACTTCATTGCCGCCACCGGAGCTTCTGCTCTTCCGGCTGCAGCGGTAAGCAGTGGTGGTGCCGCCGCCGGGGCTTCCTCCTCTGGGCCGCTCCTCGATCCTTCGTTGTATGCAGCGCCACTTAACCCTTTCATTTCTGGCAGTGGTACGCAGTTCTTTCCTCACCCAAGATCTTGA 1029 0.5695 MAGLFSLGGGGGGGGGRGGGGSNQDDEPHHHNNPPTGVPHPDALFWYKSNEDVSCYRGFELWNQQQHQVMPPQARPLLPQDLYSLGVGPSSRSSDDHSSSRSGVMMMRSGGGSGGGGGGISCQDCGNQAKKDCPHMRCRTCCKSRGYDCHTHVRSTWVPAAKRRERQQQQQQQQLQLGAGDNNPKRLRDTCNNNPSPSTHVQMPTHSSSAEGLEHGNLPAVLSSSAEFRCVRVSSMDEADEQYAYQTAVNIGGHVFRGILYDQGPDPIYMSTSDTSPGGAVQPLNFIAATGASALPAAAVSSGGAAAGASSSGPLLDPSLYAAPLNPFISGSGTQFFPHPRS 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0124 342 MobiDBLite consensus disorder prediction 160 214 - -
Lele49g0124 342 Pfam Domain of unknown function (DUF702) 119 266 - -
Lele49g0124 342 MobiDBLite consensus disorder prediction 86 106 - -
Lele49g0124 342 MobiDBLite consensus disorder prediction 162 212 - -
Lele49g0124 342 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 121 163 IPR006510 -
Lele49g0124 342 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 218 265 IPR006511 -
Lele49g0124 342 MobiDBLite consensus disorder prediction 1 43 - -
Lele49g0124 342 MobiDBLite consensus disorder prediction 80 118 - -
Lele49g0124 342 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 23 326 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0124 Lele-ChrLele49 771292 772873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0124 1 342 C2H2 Transcription Factor Family AT3G51060 45.692 3.99e-76 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lele49g0124 DUF702 9.6e-63 No_clan