Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0116 ATGGTCAACTGGAATTGGAAATCCACTTTCCGATTGATCAAACCCTCGCCCAAACTATTCTGGGAACGCCGATGTATTCCTCCGGCTATAGTTTCCGGTTTCAGGGGGTTCTCCAGTGGAAGTAGCGCTCTGTTACAAGGCAACATTTTTCGAGGAAAACAGAGGCTTTTCCCTATTTCCGATTACTTAGAAACAGCAGAAATTTGTATCGGAATGCCGGGTGGAGTTCAGCGTCAATGTTATAGTTCATTAGCTGGGTTGGTTCATAGGAGCCCTCGGTTTTCAACGTTAAATGATGAGGATATTAGATATTTTGGGGGCATACTAGGGAACAAAAATGTCATCCAGGACGAGGAGAGGCTTGTTGCCGCCAATACTGATTGGATGCACAAATATAAAGGATCTAGTAAACTTCTGTTGCTGCCACGGAGCACCGAGGAGGTATCTCAGATACTAAAATACTGCAACTCTAGGTGCTTAGCTGTTGTTCCACAAGGTGGAAATACTGGTCTTGTGGGTGGAAGTGTACCTGTTTATGATGAAGTGATTATCAATATTGGTTTGATGAATAAAATCATATCTTTTGACAAGGTAAGTGGTATATTGGTGTGTGAAGCAGGATGCATATTGGAAAATATAATAACATTCCTGGACAATGAAGGATTTATTATGCCACTAGACTTAGGTGCCAAAGGCAGCTGCCATATTGGTGGAAATGTCTCAACTAATGCTGGTGGTTTGCGCCTTGTTCGCTTTGGATCCCTTCATGGAAATGTACTTGGTCTTGAAGCTGTTCTAGCAAATGGTACTGCAATTGACATGCTTAAGACACTACGTAAAGATAACACTGGCTATGACTTGAAACATCTATTTATAGGAAGTGAAGGTTCCCTAGGAATTGTTACTTTCCATACTTACGCCACCAAAATTATCTTCCACCAATGTGGCTTTTCTTGCTTGTAA 963 0.4174 MVNWNWKSTFRLIKPSPKLFWERRCIPPAIVSGFRGFSSGSSALLQGNIFRGKQRLFPISDYLETAEICIGMPGGVQRQCYSSLAGLVHRSPRFSTLNDEDIRYFGGILGNKNVIQDEERLVAANTDWMHKYKGSSKLLLLPRSTEEVSQILKYCNSRCLAVVPQGGNTGLVGGSVPVYDEVIINIGLMNKIISFDKVSGILVCEAGCILENIITFLDNEGFIMPLDLGAKGSCHIGGNVSTNAGGLRLVRFGSLHGNVLGLEAVLANGTAIDMLKTLRKDNTGYDLKHLFIGSEGSLGIVTFHTYATKIIFHQCGFSCL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0116 320 FunFam D-2-hydroxyglutarate dehydrogenase, mitochondrial 190 309 - -
Lele49g0116 320 ProSiteProfiles PCMH-type FAD-binding domain profile. 132 311 IPR016166 GO:0071949
Lele49g0116 320 SUPERFAMILY FAD-binding/transporter-associated domain-like 100 307 IPR036318 GO:0050660
Lele49g0116 320 Pfam FAD binding domain 138 273 IPR006094 GO:0050660
Lele49g0116 320 Gene3D - 190 308 IPR016169 -
Lele49g0116 320 FunFam D-2-hydroxyglutarate dehydrogenase, mitochondrial 88 187 - -
Lele49g0116 320 Gene3D - 88 187 IPR016167 -
Lele49g0116 320 PANTHER D-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL 85 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0116 Lele-ChrLele49 711279 714318 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0116 49 711279 714318 Lele54g0545 54 11893061 11894809 CCT
Lele49g0116 49 711279 714318 Lele56g0889 56 7479772 7481399 CCT
Lele49g0116 49 711279 714318 Lele51g0124 51 727172 740521 hybridization
Lele49g0116 49 711279 714318 Lele52g0134 52 792419 798981 hybridization