Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0101 ATGCCTCCTCTTCTCTTTCTACTGGTGTTCTGCGCACCGTTCCTAACGTGCGCAGAGCGAAGCAGCGTCGCCATTGCTGAGATCGGAGCCTTAACGACCTTAAGGCTCAACCTTCAGGATCCTCTCGGCGCTCTCGACGGTTGGGATGCTTCCACGCCGGCCGCTCCTTGCGACTGGCGCGGAGTTGCTTGTTACAACAACAGGGTCACCGAGTTGCGCTTGCCTCGGCTTAAACTCAGTGGCCGGCTTACTGACCGTCTTTCCGACTTGCGCATGTTGCGGAAGCTGAGCCTTCGCTCTAACTCCTTCAACGGGACCATCCCTTCGTCGCTCGGTAAATGTACCTTCCTGCGCGCCGTGTTTCTGCAGTCCAACTCACTCTCCGGTATTCTCCCGCCGGAGATCCGAAACATCGCTGGCCTTCAGATTCTTAATGTCGCGCAAAACCATCTCTCCGGCCGATTACCCGCCGACCTCCCGTTGAGCCTGAAGTACATCGACCTTTCGTCGAACTCCTTTTCTGGCGAGATTCCGAGTGCCATTGCCAACCTTTCTCAGCTTCAGCTCATCAACCTGTCGTACAACCAGTTCTCGGGCGAGATTCCGGCGATCTTTGGACAGCTTCAGCAGCTCGAATACCTCTGGCTTGATCACAATCTTCTCGGAGGAACTCTACCTTCGGCACTCGCTAACTGCTCTTCCCTCGTGCATCTGAGCATAGAAGGAAATGCACTTGGAGGAGTGATCCCGGCGGCCATTGCGGCTCTTCCGAGGCTTCAGGTGATATCTCTCTCCCAGAATAATCTTACCGGATCGATCCCGGCTTCCATTTTCTGCAACATTTCAGTCTACACTCCATGGCTTCGAATCGTTCAGTTAGGATTTAATGGTTTCACCGATATTGTCGAGCCTCAGGCGTCATCGTGTTTCAGTGTTCTTCAGGTTTTGGATATTCAGCACAATAGCATACACGGCACGTTTCCCTTGTGGATAACAAATATGTCCACGTTAACAATGCTTGATGTTTCCAATAATGCATTTTCTGGCAAGATTCCATCACAAATCGGAAACCTCGCGAAATTGGAGGAGTTAAGGATGGCCAACAATTCATTTACTGGGATGATTCCAGAGGAAATCAAGAAATGTGCTTTCCTGCGTGTTATTGATTTTGAAGGCAACCGGTTTACCGGAGAAGTTCCTTCGTTCTTTGGTTATATGTCAGGTCTGAAGGTGCTGTCCCTTGGTGGGAATCTTTTCTCTGGTAAAGTTCCGGAGAGTTTTGGTAAACTTTCGGCGCTGGAAACCCTGAGTTTGAGAGCTAATAACTTGAATGGAACCATGCCCAAGGAAGTCATGGGATTGAGCAATATTTCAAGTCTTGATCTTAGCGGAAACAAGTTTATGGGTCAGATATCTTCAAGTATTCGGAACCTGAGTCGATTAATGGTTCTCAATCTGAGTGGCAACGGCTTTTCTGGAAAAATTCCTGCTAGTTTGGGGAATCTTTTCAGGCTAACTACACTAGACTTGAGCAAACAGAATCTTTCTGGAGAGTTACCATTTGAGCTTTCAGGTTTGCCGAATCTGCAAGTTATTGCCTTGCAGGAGAACAGATTATCTGGGGACGTTCCTGAAGGGTTTAGCAGTTTGACGAATCTGCGATATGTGAACCTGAGCACTAATGCGTTTTCGGGACATATTCCTCAAAATTATGGCTTTCTTCGATCACTGGTTGCTCTTTCTTTGTCTGACAATCACATTACAGGAGTAATTCCTTCGGAGATCGGAAACTGCTCCGATATTGAGATTCTTGAGCTTGGTTCAAATTCTGTGACAGGTCATATTCCAACTGATCTCACTCGTCTCGCCCATTTGAGAGAGCTTGATTTGAGTAGAAACAAATTAACCGGAGATATACCCGGTGATATCTCCAAATGTTCGTCCTTAAATGCTCTGCTGGTGGACCACAACCGTCTTTCAGGCAATATACCGGAGTCACTGTCTGAGCTATCAAACCTGACAATGCTGGATCTCTCAGCTAACAACTTGAGCGGGGAAATATCGATTAATATTTCCATGATGCCTAATTTATTGTCCTTCAATGTCTCTGGAAATAACCTGGAAGGTGAGATACCGCCAACCTTGGGTGCTCGATTCAACAATACCTCTGCATTTGCTGATAATCAGAACTTATGTGGGAAGCCACTGGATAGGAAGTGTGAAAATGTAGTTGATAGGGACAGGAAGAGGTTGATAGTGTTGATTGTTGTAGTTGGTGCTGGAGCTTGCTTACTATCATTGTGTTGCTGCTTCTACATATACAGCCTTTTGCGGTGGCGGAAAAGGCTCAAGGAACGGGCGTCTGGGGAGAAAAAAAGGAGTCCTGCTAGGGCGAGTTCTGGTGCAAGTGGAGGTCGAGGCAGCACTGATAATGGTGGACCAAAACTGGTCATGTTTAATACCAAAATCACACTTACAGAAACCTTTGAAGCAACTAGGCAGTTTGATGAAGAAAATGTGCTGAGCAGAACTAGGTACGGATTGGTATTCAAGGCTTGCTACAATGACGGAATGGTGCTTTCAATTCGCAGACTCCAAGATGGATCTCTGGACGAAAACATGTTCAGGAAAGAAGCAGAATCACTAGGAAAAGTGAAGCACCGAAATTTAACCGTTCTGAGAGGTTACTATGCCGGGCCACCGGACATGAGGCTTCTGGTCTATGATTACATGCCCAATGGAAACCTTGCAACCCTCCTCCAAGAAGCTTCTCATCAGGATGGCCATGTTCTGAATTGGCCAATGCGCCACCTCATTGCACTTGGCATTGCTCGTGGCTTAGCTTTTCTCCACCAGTCCTCAATGGTTCATGGCGACGTTAAACCACAAAGTGTCCTGTTCGATGCTGATTTCGAAGCTCATTTGTCAGATTTTGGGCTCGACCGCCTTACAGTAGCCACCCCTGGCGGACCCTCCACTTCAACCTCAGCGGGGGGCGCATTGGGTTACGTATCACCGGAAGCTGTATTAACAGGGGAAGCCACGAAAGAGTCTGATGTGTACAGCTTTGGCATAGTGTTGCTCGAGCTTCTTACCGGAAAGCGACCGGTGATGTTCACACAGGATGAAGATATAGTGAAATGGGTGAAGAAACAGCTGCAAAAGGGCCAAATCACGGAGTTGTTGGATCCAGGATTGCTTGAGCTCGATCCAGAATCATCCGAGTGGGAAGAGTTCTTGCTCGGTGTGAAAGTAGGGTTGCTCTGCACGGCACCGGACTCTCTTGATCGACCAACCATGTCTGACATTGTGTTCATGCTTGAAGGCTGCCGCGTCGGACCCGACATCCCATCCTCCGCCGATCCCACCTCTCAACCTTCGCCGGCGTGA 3390 0.4829 MPPLLFLLVFCAPFLTCAERSSVAIAEIGALTTLRLNLQDPLGALDGWDASTPAAPCDWRGVACYNNRVTELRLPRLKLSGRLTDRLSDLRMLRKLSLRSNSFNGTIPSSLGKCTFLRAVFLQSNSLSGILPPEIRNIAGLQILNVAQNHLSGRLPADLPLSLKYIDLSSNSFSGEIPSAIANLSQLQLINLSYNQFSGEIPAIFGQLQQLEYLWLDHNLLGGTLPSALANCSSLVHLSIEGNALGGVIPAAIAALPRLQVISLSQNNLTGSIPASIFCNISVYTPWLRIVQLGFNGFTDIVEPQASSCFSVLQVLDIQHNSIHGTFPLWITNMSTLTMLDVSNNAFSGKIPSQIGNLAKLEELRMANNSFTGMIPEEIKKCAFLRVIDFEGNRFTGEVPSFFGYMSGLKVLSLGGNLFSGKVPESFGKLSALETLSLRANNLNGTMPKEVMGLSNISSLDLSGNKFMGQISSSIRNLSRLMVLNLSGNGFSGKIPASLGNLFRLTTLDLSKQNLSGELPFELSGLPNLQVIALQENRLSGDVPEGFSSLTNLRYVNLSTNAFSGHIPQNYGFLRSLVALSLSDNHITGVIPSEIGNCSDIEILELGSNSVTGHIPTDLTRLAHLRELDLSRNKLTGDIPGDISKCSSLNALLVDHNRLSGNIPESLSELSNLTMLDLSANNLSGEISINISMMPNLLSFNVSGNNLEGEIPPTLGARFNNTSAFADNQNLCGKPLDRKCENVVDRDRKRLIVLIVVVGAGACLLSLCCCFYIYSLLRWRKRLKERASGEKKRSPARASSGASGGRGSTDNGGPKLVMFNTKITLTETFEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLQDGSLDENMFRKEAESLGKVKHRNLTVLRGYYAGPPDMRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHQSSMVHGDVKPQSVLFDADFEAHLSDFGLDRLTVATPGGPSTSTSAGGALGYVSPEAVLTGEATKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLDPGLLELDPESSEWEEFLLGVKVGLLCTAPDSLDRPTMSDIVFMLEGCRVGPDIPSSADPTSQPSPA 1129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0101 1129 SUPERFAMILY L domain-like 53 279 - -
Lele49g0101 1129 PRINTS Leucine-rich repeat signature 625 638 - -
Lele49g0101 1129 PRINTS Leucine-rich repeat signature 670 683 - -
Lele49g0101 1129 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 348 1107 - -
Lele49g0101 1129 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 520 615 - -
Lele49g0101 1129 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 911 1115 - -
Lele49g0101 1129 Pfam Leucine rich repeat 162 221 IPR001611 GO:0005515
Lele49g0101 1129 Pfam Leucine rich repeat 575 635 IPR001611 GO:0005515
Lele49g0101 1129 Pfam Leucine rich repeat 313 370 IPR001611 GO:0005515
Lele49g0101 1129 Pfam Leucine rich repeat 385 443 IPR001611 GO:0005515
Lele49g0101 1129 SMART LRR_typ_2 694 718 IPR003591 -
Lele49g0101 1129 SMART LRR_typ_2 256 280 IPR003591 -
Lele49g0101 1129 SMART LRR_typ_2 478 502 IPR003591 -
Lele49g0101 1129 SMART LRR_typ_2 358 382 IPR003591 -
Lele49g0101 1129 SMART LRR_typ_2 574 598 IPR003591 -
Lele49g0101 1129 SMART LRR_typ_2 430 454 IPR003591 -
Lele49g0101 1129 SMART LRR_typ_2 90 114 IPR003591 -
Lele49g0101 1129 SMART LRR_typ_2 208 232 IPR003591 -
Lele49g0101 1129 SMART LRR_typ_2 184 207 IPR003591 -
Lele49g0101 1129 SMART LRR_typ_2 526 549 IPR003591 -
Lele49g0101 1129 SMART LRR_typ_2 622 646 IPR003591 -
Lele49g0101 1129 SMART LRR_typ_2 406 429 IPR003591 -
Lele49g0101 1129 Gene3D Ribonuclease Inhibitor 26 159 IPR032675 -
Lele49g0101 1129 ProSiteProfiles Leucine-rich repeat profile. 624 646 IPR001611 GO:0005515
Lele49g0101 1129 FunFam Putative LRR receptor-like serine/threonine-protein kinase 798 910 - -
Lele49g0101 1129 Gene3D Ribonuclease Inhibitor 453 743 IPR032675 -
Lele49g0101 1129 Gene3D Transferase(Phosphotransferase) domain 1 911 1115 - -
Lele49g0101 1129 MobiDBLite consensus disorder prediction 788 815 - -
Lele49g0101 1129 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 25 182 - -
Lele49g0101 1129 SUPERFAMILY Protein kinase-like (PK-like) 815 1117 IPR011009 -
Lele49g0101 1129 Pfam Leucine Rich Repeat 481 502 IPR001611 GO:0005515
Lele49g0101 1129 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Lele49g0101 1129 Gene3D Phosphorylase Kinase; domain 1 811 910 - -
Lele49g0101 1129 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 616 740 - -
Lele49g0101 1129 SMART LRR_sd22_2 160 186 - -
Lele49g0101 1129 SMART LRR_sd22_2 670 693 - -
Lele49g0101 1129 SMART LRR_sd22_2 208 234 - -
Lele49g0101 1129 SMART LRR_sd22_2 256 283 - -
Lele49g0101 1129 SMART LRR_sd22_2 334 360 - -
Lele49g0101 1129 SMART LRR_sd22_2 454 480 - -
Lele49g0101 1129 SMART LRR_sd22_2 622 651 - -
Lele49g0101 1129 ProSiteProfiles Protein kinase domain profile. 835 1116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0101 1129 FunFam Uncharacterized protein 256 472 - -
Lele49g0101 1129 SUPERFAMILY L domain-like 286 567 - -
Lele49g0101 1129 Pfam Protein tyrosine and serine/threonine kinase 839 1054 IPR001245 GO:0004672|GO:0006468
Lele49g0101 1129 Gene3D Ribonuclease Inhibitor 160 452 IPR032675 -
Lele49g0101 1129 SUPERFAMILY L domain-like 473 735 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0101 Lele-ChrLele49 617995 621384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0101 4 1129 Receptor kinase-like Gene Family AT4G36180 68.865 0.0 1508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Lele49g0101 PK_Tyr_Ser-Thr 3.5e-31 CL0016