Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0099 ATGATGGAACCGATGGAGTCTTGTGTCCCACCGGGCTTTCGGTTCCACCCGACAGATGAAGAGCTCGTTGGTTATTATCTCAGGAAGAAAGTTGCTTCTCAGAAGATAGATCTTGACGTTATCAGAGAGATCGATCTCTATCGCATTGAACCATGGGATCTGCAAGAAAGATGCAGGATCGGGTATGAGGAACAGAACGAGTGGTATTTCTTCAGCCACAAAGATAAGAAGTATCCGACGGGGACGAGGACGAACAGAGCAACCATGGCTGGGTTCTGGAAGGCGACAGGAAGAGACAAGGCAGTGTACGACAAGACCAAGCTCATAGGAATGAGGAAGACCCTTGTTTTCTACAAAGGAAGAGCCCCTAATGGACAGAAAACTGACTGGATCATGCACGAGTATAGGCTTGAATCTGATGAAAATGCACCCCCTCAGGAAGAAGGCTGGGTTGTTTGCAGAGCATTCAAGAAAAAAACCAATGGGCAAACGAAGACAATAGAAGGATGGGATTCAGGTTACTTTTATGAGGAGACAGGTGGAGTCGACTACGTATCAAGGCAGGCGCAGAGTTTCATAGCTCCAAGTTTTTTGTGTAAGAAGGAGATCGAAGCAGATAATAACTTGAGCTTCATGCACTCATCCTCAGATCAGTTCGTAGAGCTTCCTCAGCTAGAAAGTCCATCTCTGCCATTAATAAAGGGGCCAAGCTCAGCCCTAGTGTCTTTAATATCACACAATAATAATAACAACAATCACAACAAGAACGAAGAAGATGACCAAAACAGGCTGGTCAACAACAACAGCAAAAGGGTAACTGATTGGAGGGATCTTGACAAATTTGTGGCTTCTCAATTGAGTCAAGATCAAGAGAGGCATGAGAGTAGTGATAATCATGGAATGTCAGGCTTTGAAACCCACGAGGCACTGCTGCTATTGCAGAGTAGTAGCGATGAAGGCAACAAGTTCATGAGCCCATTTTTAAATGGAAGCTCAGACTGTGACATTGGGATATGCGTGTTTGAGAAATGA 1032 0.4486 MMEPMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKTKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLESDENAPPQEEGWVVCRAFKKKTNGQTKTIEGWDSGYFYEETGGVDYVSRQAQSFIAPSFLCKKEIEADNNLSFMHSSSDQFVELPQLESPSLPLIKGPSSALVSLISHNNNNNNHNKNEEDDQNRLVNNNSKRVTDWRDLDKFVASQLSQDQERHESSDNHGMSGFETHEALLLLQSSSDEGNKFMSPFLNGSSDCDIGICVFEK 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0099 343 FunFam NAC domain-containing protein 18 162 - -
Lele49g0099 343 SUPERFAMILY NAC domain 5 158 IPR036093 GO:0003677|GO:0006355
Lele49g0099 343 Pfam No apical meristem (NAM) protein 10 137 IPR003441 GO:0003677|GO:0006355
Lele49g0099 343 MobiDBLite consensus disorder prediction 245 264 - -
Lele49g0099 343 Gene3D NAC domain 18 163 IPR036093 GO:0003677|GO:0006355
Lele49g0099 343 ProSiteProfiles NAC domain profile. 9 158 IPR003441 GO:0003677|GO:0006355
Lele49g0099 343 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0099 Lele-ChrLele49 603656 605693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0099 2 342 NAC Transcription Factor Family AT2G18060 60.054 6.18e-158 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele49g0099 NAM 2.5e-38 No_clan