Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0093 ATGAAGCGGGCAAGGAAATCGAACAGGGTTTCGTGGGCTCCTGGATTTAATCTGTGTCAGGTGAAGTTGTTCTTATCTGAAGACTACCCTTCGAAAGTTAGCCAGACATCTCAAGATCTGCTTCAAGCAAAGAAATCATCAACTTTGCATTCAAGCACTACCGAATCTTATGATTTACCTCCTGGCTTTGAAGGCAATCATTTTTTGAACCATCTAAGTAACGAACTCTCCCACTTATATCAGATTAAATGGAAAGCTCCTCCCCGGTTTGCTCTCAGTCAAAATTGGCTAGTTGCAGCTGGTGAAGAAAGTAGGGAGAAAATGGATCAAAAGCTAAGAGAAATGAAGGTGCTTGAAGCAGTATATCCACGCCCGTCAGCTATTCCTCCAAGTCCATCTGTTGCTTTAGTTGTAGGGGAGGAAGACTATGATGATAACCTTACTCCCCTTATCCCTATCGTTCCAATTGAGGAAGAAGAGCTTATGGATATTAACCATGAATTGTCAGCAACAATTGACACCTCCGCCACTCTGCAGACACTAAGTATGCACCAACCCATATCAGCAACAGATAGACTCATATGTTCACAGCCTAGTACCTCATCCACTCTAGTCTCACCTGGCACATCTGGTTTGGAAGCAGATCTTGCTGCAGCTTCTGCTGTTGCTGCTGCCATCATGAATAGTAATGAGCAAGGCAGCTCAATTGACATGGATCTACTTGTTAGAATACTTAATGATCCATTATTGATTGAGAAGTTGAGAAGTGCTCATGATGGAGCTGCAGCGACCACTGTAAGTGCATCCGCAAATATATTGGGTTTACCTAGTTCTGGATTCAAGTGCGCTTCTCCATTAGTTTCATCATCTACACTTGGACCTGATAAGCCAACTTCTGGGGTTAATACCTCAAGTATTGTGGGTTTGTTTCCTGATTCTGGCTTGATGCCAGCAACTTCTTCGGTTGAATTGATGCATACACTAGTTAAGCCAGCAACCCCATCACTTCTATTTTCTAGGCCTATGCCAGGGAAACTAGAAACTCCGTCAGCTCCATTGCTCTCACATACCACTACTGCTGATATTCACCTGCATGTGAACAAAACCACTGACCATTTTTCAAGTGGTGGTCTGCCATCTGTAACTACCACCCAACGTCCTCAACAAGATACTGTTAACCAAGCAGCACCCGTGTCATCCATTTCATCCAGGGAACCGAGCATGGTGCCATTAACTTCAACAGGCGAGAGCATGCTTGCAGTAGTAAACCAGGTGCGACCCCCTACAAGTACAATGGCTTACAGACCTAGTACAGGCTCAGCATTTGCTGGGAAGGAAACTCATCCTGTGAAGGATCTCAGCTATTATAAGAACCTTATTAGGCAACATGGTGCAGATGGTAATAATACTAGGCAAGAGACGCATGACTCCCAAATAGCTATCCGTCAAACTAATTTCAAAGATCTGAAACTGGTTCATAACAATAAACCAGGAGAAGTGAATTTCAAAATCCAGAAACCTTGCATATTCTTCAAAAGTTCAAGGGGTTGTCGAAATGGTTCCAATTGCCCTTATCAGCATGACATGCCAGCCCAATTGGGGTCTGGTAACATCCTAGGGTCCCATATTGCAAAAAGAGCTAAATTAGGACCAGAAGTCAGGGGTAGAACATTAATTTAG 1680 0.4357 MKRARKSNRVSWAPGFNLCQVKLFLSEDYPSKVSQTSQDLLQAKKSSTLHSSTTESYDLPPGFEGNHFLNHLSNELSHLYQIKWKAPPRFALSQNWLVAAGEESREKMDQKLREMKVLEAVYPRPSAIPPSPSVALVVGEEDYDDNLTPLIPIVPIEEEELMDINHELSATIDTSATLQTLSMHQPISATDRLICSQPSTSSTLVSPGTSGLEADLAAASAVAAAIMNSNEQGSSIDMDLLVRILNDPLLIEKLRSAHDGAAATTVSASANILGLPSSGFKCASPLVSSSTLGPDKPTSGVNTSSIVGLFPDSGLMPATSSVELMHTLVKPATPSLLFSRPMPGKLETPSAPLLSHTTTADIHLHVNKTTDHFSSGGLPSVTTTQRPQQDTVNQAAPVSSISSREPSMVPLTSTGESMLAVVNQVRPPTSTMAYRPSTGSAFAGKETHPVKDLSYYKNLIRQHGADGNNTRQETHDSQIAIRQTNFKDLKLVHNNKPGEVNFKIQKPCIFFKSSRGCRNGSNCPYQHDMPAQLGSGNILGSHIAKRAKLGPEVRGRTLI 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0093 559 MobiDBLite consensus disorder prediction 373 407 - -
Lele49g0093 559 ProSiteProfiles Zinc finger C3H1-type profile. 502 530 IPR000571 GO:0046872
Lele49g0093 559 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 2 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0093 Lele-ChrLele49 568760 573041 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lele49g0093 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0093 49 568760 573041 Lele51g0104 51 596002 600847 hybridization
Lele49g0093 49 568760 573041 Lele52g0109 52 643875 647750 hybridization