Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0085 ATGGAACCTCAACAGCAACAGGCAGCAAACGAGGATGCTGGAGGGAGTGGAAGAGGAGGGTATTTGTGCCGGCAAAGCAGTACAAGGTGGACTCCCACAAGTGATCAGATAAGGATACTGAAGGACCTTTATTACAAAAATGGAGTTAGGTCCCCAAATGCAGAGCAGATTCAGAGGATCTCTGCTAGGCTGAGGCAGTACGGCAAGATTGAAGGCAAGAACGTCTTTTACTGGTTCCAGAACCACAAGGCTCGTGAACGCCAGAAGAAACGCTTCACTTCCTCCTCTGATCATCTCCCCACTCCCATGCATTTGCAGAGACCTCCTTCTTCCACTACTACTAACAATATCCTTCCACCTTCTAACTGGAAGCCTGAGCACGAATCCATTCTTCACCCCAAGTATTCTAACATACCATCTCACGGCGTTTCTTCTGCTTCATCTTCTACTGCTGGGATGGTTACTCTGGGCCAGATGGGGAACTATGGGTATGGATCTGTTACTATGGAGAAGTGTTTTAGGGACTGCTCAATATCAGCAGGAGGAAGCAGTGGTCCCATAAACCACAATTTGGGATGGATAGGTATGGATCCATACTCAAACTACACGAACTTCTTGGACAAAATAAGGCCTGGCGATCAAGAAATACTTAAAGACGAACGAGAAGGAGAAGATGGAGCCCCTGAGATTGAAACCCTCCCTCTGTTTCCCATGCACGGTGAGGACATCAATGGCTACTACAACCTCAGGTCAGCTGATTCTTCTTACTATGGCGGTGGCTGGTATCACGCCGATGAATATGGCTTCAAGAACAATGGCTCTCACCGTACTTCCCTCGAGCTCACTCTCAACTCCTACACCCGCCGATCTCCAGATTCAATTTGA 885 0.4802 MEPQQQQAANEDAGGSGRGGYLCRQSSTRWTPTSDQIRILKDLYYKNGVRSPNAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSSSDHLPTPMHLQRPPSSTTTNNILPPSNWKPEHESILHPKYSNIPSHGVSSASSSTAGMVTLGQMGNYGYGSVTMEKCFRDCSISAGGSSGPINHNLGWIGMDPYSNYTNFLDKIRPGDQEILKDEREGEDGAPEIETLPLFPMHGEDINGYYNLRSADSSYYGGGWYHADEYGFKNNGSHRTSLELTLNSYTRRSPDSI 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0085 294 MobiDBLite consensus disorder prediction 87 148 - -
Lele49g0085 294 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 6 287 IPR044555 GO:0003700|GO:0099402
Lele49g0085 294 SMART HOX_1 25 93 IPR001356 GO:0003677
Lele49g0085 294 Gene3D - 27 93 - -
Lele49g0085 294 MobiDBLite consensus disorder prediction 95 122 - -
Lele49g0085 294 CDD homeodomain 28 90 IPR001356 GO:0003677
Lele49g0085 294 Pfam Homeodomain 27 88 IPR001356 GO:0003677
Lele49g0085 294 MobiDBLite consensus disorder prediction 1 27 - -
Lele49g0085 294 ProSiteProfiles 'Homeobox' domain profile. 23 89 IPR001356 GO:0003677
Lele49g0085 294 SUPERFAMILY Homeodomain-like 21 92 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0085 Lele-ChrLele49 525967 527401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0085 21 245 Wox Gene Family AT2G17950 41.569 6.80e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele49g0085 Homeodomain 1.6e-17 CL0123