Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0080 ATGGATCAGTGGAAACCTGAAGATTTGTCTAAATCTGCATCTGTTGCGGCGGATTTAGCGCCTTCTTCTCTTCAGCCTCAGTCGCAACTTGTTACCGTCCCCTCTAACCGCTTGCAGAATTCGTATACCGAATCCAGGCAGAGGCCTGAAGCTGAAGCACAAGATCCAGTTGCTGCAAGAAAACTGCAGAAGGCAGACCGCGAGAAACTGAGGAGGGATCGACTAAATGAGCATTTCCTAGATCTGGGAAACACATTAGATCCAGATAGGCCAAAGAATGACAAGGCCACTATCCTTACAGACACAATTCAGGTGCTAAAAGATTTAACTGCTGAAGTCAATAAACTAAAAGCTGAGCATGCTGCACTTTCTGGAGAATCACATGAACTAATGCAGGAGAAATATGAACTTAGAGAAGAGAAGTCATCTCTAAAATCTGACATTGAAAATCTTAATGCACAGTATCAGCAGAGAGTCAGAGTCACATTCCCATGGACGGCAATCGATCATTCAGTTGTTATGGCTCCACCGTTTTCGTATCCAGTTCCTATACCCATTCCTTCCGCTCCAATTTCCCTTCATCCATCACTTCATCCTTTTCCTTTCTTTGGAAACCAAAATCCAGGTCCGATTCCCAATCCTTGTTCCACATATGTCCCCTTTTCTGCTCCAGCTAATCCCCCGGCCGAGCAGCCAACTGGCCAATATGCTTCAACATCCAACACTTCGAGCAAACAAGATTCCAGAAGTAAGTCGCCAGATCATGAAAGGACCGGCGATGCTGAAAGATGTGGTGAGTCTAACGATGTGGCTACGGCGCTTGAACTTAAGATGCCCGGATCATCATTGCGGCAGGAATCATCTTCTGGAGCAAGGAAGGGCAAGCATTCATTAAGGAAGGAGAGAAATATCACAGATGGGAGTACTTCAAGTAGGCATTCTTCATCGCGAGGACCTCAAGATAGCTCCAACAGCGTGGGTGAAATCCCGAAGTCTGATAAATCATAA 1008 0.4573 MDQWKPEDLSKSASVAADLAPSSLQPQSQLVTVPSNRLQNSYTESRQRPEAEAQDPVAARKLQKADREKLRRDRLNEHFLDLGNTLDPDRPKNDKATILTDTIQVLKDLTAEVNKLKAEHAALSGESHELMQEKYELREEKSSLKSDIENLNAQYQQRVRVTFPWTAIDHSVVMAPPFSYPVPIPIPSAPISLHPSLHPFPFFGNQNPGPIPNPCSTYVPFSAPANPPAEQPTGQYASTSNTSSKQDSRSKSPDHERTGDAERCGESNDVATALELKMPGSSLRQESSSGARKGKHSLRKERNITDGSTSSRHSSSRGPQDSSNSVGEIPKSDKS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0080 335 MobiDBLite consensus disorder prediction 16 47 - -
Lele49g0080 335 Pfam Helix-loop-helix DNA-binding domain 60 109 IPR011598 GO:0046983
Lele49g0080 335 Coils Coil 99 154 - -
Lele49g0080 335 CDD bHLH_AtILR3_like 64 138 - -
Lele49g0080 335 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 59 109 IPR011598 GO:0046983
Lele49g0080 335 MobiDBLite consensus disorder prediction 248 264 - -
Lele49g0080 335 MobiDBLite consensus disorder prediction 289 307 - -
Lele49g0080 335 MobiDBLite consensus disorder prediction 214 335 - -
Lele49g0080 335 MobiDBLite consensus disorder prediction 228 247 - -
Lele49g0080 335 PANTHER TRANSCRIPTION FACTOR BHLH121 27 332 IPR044579 GO:0003700|GO:0055072
Lele49g0080 335 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 60 130 IPR036638 GO:0046983
Lele49g0080 335 Gene3D - 58 135 IPR036638 GO:0046983
Lele49g0080 335 MobiDBLite consensus disorder prediction 308 329 - -
Lele49g0080 335 MobiDBLite consensus disorder prediction 1 70 - -
Lele49g0080 335 SMART finulus 65 115 IPR011598 GO:0046983
Lele49g0080 335 MobiDBLite consensus disorder prediction 48 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0080 Lele-ChrLele49 497355 500287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0080 50 282 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 57.627 1.95e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele49g0080 HLH 2.6e-08 No_clan