Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0053 ATGTTATCAAGGATGATGGACTTTCTGAACGCCTGCTGGCGACCGTCCTCGGACCAATATATCCACAAAGGTTCAGATGTGTCTGGTCGGCAGGAGGGATTACTTTGGTACAAAGACGCTGGCCAGCACTTAACTGGTGAATTCTCAATGGCTGTTGTACAGGCCAACAATTTGCTTGAGGATCAGAGCCAAATAGAAACTGGTCCCCTTAGCTTGCTTGAGACTGGCCCCTACGGGACCTTCCTTGGAATATACGACGGTCACGGTGGACCTGAGACATCACGTTACATTTGTGATAATCTCTTCCAACACCTTAAACGTTTTACTTCTGAGCAGCAGTCTATGTCAGTGGATGTAATACAAAAAGCATACCAAGCAACTGAAGAGGGTTTTGTATCCCTAGTTACCAAACGCTGGCCTATAAACCCCCAAATTGCTGTTGTGGGATCATGCTGTTTGGTTGGTGTAATTTGTAGCGGTACCCTCTACATTGCTAACCTTGGCGACTCCCGTGCTGTGCTTGGGAGGGCTGTCAGAGCAACTGGAGAGGTTCTGGCAGTCCAACTATCTTCAGAGCATAACGTGAGCATAGAATCTGTGAGACAAGAGATGCATTCTTTGCATCCAGATGACTCGCAGATCGTGGTTTTAAAGCACAACGTATGGCGTGTGAAGGGCCTGATACAGGTTTCCCGATCAATTGGTGATGTGTATCTCAAAAGGGCAGAATTTAACAAGGAACCTTTATATGCTAAGTTTCGTCTTCGTGAACCTTTTAGAAGACCAATTTTGAGCTCTGAGCCATCTATTTCTGTCCATGAACTTCAACAGCATGATCAATTCCTCATATTTGCTTCTGATGGCTTGTGGGAACAACTTAGCAATCAGGATGCAGTTAATATAGTTCAAAATCACCCACGCAATGGAAGTGCTCGGAGACTGGTCAAAGCCGCCTTGCATGAAGCAGCCAAGAAAAGAGAGATGAGATACTCAGATTTAAAGAAAATTGACCGAGGTGTCCGCCGCCATTTCCATGATGACATTACAGTAGTAGTTGTATTCCTTGACTCCAATCTTGTGAGCAGAGCTGGGCCGGAGAGAGGTCCTACTTTATCAGTGAGGGGTGGCGGTGTTAACATACGTGCTAAAACTCTGGCTCCCTGTGCTACTCGTTTGGAAACTTAG 1185 0.4599 MLSRMMDFLNACWRPSSDQYIHKGSDVSGRQEGLLWYKDAGQHLTGEFSMAVVQANNLLEDQSQIETGPLSLLETGPYGTFLGIYDGHGGPETSRYICDNLFQHLKRFTSEQQSMSVDVIQKAYQATEEGFVSLVTKRWPINPQIAVVGSCCLVGVICSGTLYIANLGDSRAVLGRAVRATGEVLAVQLSSEHNVSIESVRQEMHSLHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKRAEFNKEPLYAKFRLREPFRRPILSSEPSISVHELQQHDQFLIFASDGLWEQLSNQDAVNIVQNHPRNGSARRLVKAALHEAAKKREMRYSDLKKIDRGVRRHFHDDITVVVVFLDSNLVSRAGPERGPTLSVRGGGVNIRAKTLAPCATRLET 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0053 394 SUPERFAMILY PP2C-like 56 356 IPR036457 -
Lele49g0053 394 PANTHER PROTEIN PHOSPHATASE 38 353 - -
Lele49g0053 394 ProSiteProfiles PPM-type phosphatase domain profile. 44 355 IPR001932 -
Lele49g0053 394 Pfam Protein phosphatase 2C 80 325 IPR001932 -
Lele49g0053 394 CDD PP2Cc 48 355 IPR001932 -
Lele49g0053 394 FunFam Phosphatase 2C family protein 36 365 - -
Lele49g0053 394 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Lele49g0053 394 Gene3D - 32 363 IPR036457 -
Lele49g0053 394 SMART PP2C_4 41 353 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0053 Lele-ChrLele49 347160 350685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0053 1 383 PP2C-type Phosphatase Gene Family AT3G51370 76.762 0.0 617