Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0051 ATGAGTGATCGGCACCGCCATTTATTGGCTGCTCCACCGCCGGAACTGGCAAAGCCACTCAATTCCAGAAGCAGTTCCCGCCAAACTATGTTGGTAGGGTTTGTTTCAGGCATTTTAGCAATAGTGGGAGTTGCATTATTGTTGTACTGCCTCTTCAAGAGAAAGGGTATTCCACTTAAATGCAAAAGGGGTTCTTCGAAAGGTGCAAAAGATGGAAAGAGTTTGAAATATGATAAGATATCGTTGAGGCGTTTTGATTTGGAGGAACTAGAGAAGGCTACAAATAATTTTAGCCCAGATTGCTTGCTGGGTTCTGGTGCATTTGGAATGGTGTACAAAGGAACCTTTAAATTAGAAGGAACATTAGCCATTAAAAGAGCTCATGGTGAATCATTCTTAAGCAAGGAAGAGTTCAGAAACGAAGTGAGCCTCATTTCGAAAGTAAATCACAGGAATCTTGTTAATTTGTTGGGATATTGTGAAGAACCTGGAGATGGGGTCCAAATTCTGGTTTATGAGTATGTGCCTAACGGTTCTCTGCTCGAGTACATGATGGGAAAAAGGGGGAAGAGCTTAACTTGGAGGCAAAGAGTAAACATAGCAATAGGAGCAGCTAAAGGTATAGCTTATTTGCATGAAGGGGTGAAACCAAGTATAATACATCGTGATATAAAACCGAGCAACATCTTAATAGGGGAAAGGTTTGAGGCTAAAGTTTCAGATTTTGGGTTGATAAAATCAGGACCAACTGGTGATCAATCTCATGTTAGCAGCCAAATCAAAGGAACCCCAGGATACCTTGATCCCACTTATTGTTCAACCTTTCATTTGACCACTTTCAGTGACGTTTATAGTTTCGGTGTCATACTTCTCCAACTTATTTCCACTAGACCAGCCGTTGATTCCACAAAAAGTCAAAATATTTCTCATATTTTTGATTGGGCAAGGCCTAGCTTAGAGAAGGGTAATGTTGAAGAAATTATAGATGCCAATTTACTATGTGAACCTTGCAATATGAAGGTTATGTTGGAGATGGGTCAGCTTGCCCTCCGATGTGGGGCTCAAGTACCGAAGCATCGTCCTACAATGACCCAAGTATATCAGGAGCTACAAGAAGCTCTCCGTGCCGCCGATAGCTTGATTGGCAAACTACCTTCGAAAAATTTCAGAAAATCAAGTGGCACATCTCAAGAATTAACAGAATCAGAGGTTCTCAAATCTATAGAAAACTATGACCGTTCGCAGAGTTTTGTAAGCATAGATGGTGTTGGGTTCCAGAAGTTTCATATTGATATGGATAGTTTATCCTTTCAAAGTACAAACTTAAGATGCCTAGAAAATAATAGTATTAGCATTGACACTGATGTCAACACTTTGAGGAGAATTCAAGAAGATATATAA 1401 0.4011 MSDRHRHLLAAPPPELAKPLNSRSSSRQTMLVGFVSGILAIVGVALLLYCLFKRKGIPLKCKRGSSKGAKDGKSLKYDKISLRRFDLEELEKATNNFSPDCLLGSGAFGMVYKGTFKLEGTLAIKRAHGESFLSKEEFRNEVSLISKVNHRNLVNLLGYCEEPGDGVQILVYEYVPNGSLLEYMMGKRGKSLTWRQRVNIAIGAAKGIAYLHEGVKPSIIHRDIKPSNILIGERFEAKVSDFGLIKSGPTGDQSHVSSQIKGTPGYLDPTYCSTFHLTTFSDVYSFGVILLQLISTRPAVDSTKSQNISHIFDWARPSLEKGNVEEIIDANLLCEPCNMKVMLEMGQLALRCGAQVPKHRPTMTQVYQELQEALRAADSLIGKLPSKNFRKSSGTSQELTESEVLKSIENYDRSQSFVSIDGVGFQKFHIDMDSLSFQSTNLRCLENNSISIDTDVNTLRRIQEDI 466
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0051 466 Gene3D Transferase(Phosphotransferase) domain 1 175 385 - -
Lele49g0051 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Lele49g0051 466 SUPERFAMILY Protein kinase-like (PK-like) 76 370 IPR011009 -
Lele49g0051 466 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 21 391 - -
Lele49g0051 466 CDD STKc_IRAK 103 372 - -
Lele49g0051 466 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 175 377 - -
Lele49g0051 466 ProSitePatterns Protein kinases ATP-binding region signature. 103 125 IPR017441 GO:0005524
Lele49g0051 466 MobiDBLite consensus disorder prediction 1 22 - -
Lele49g0051 466 ProSiteProfiles Protein kinase domain profile. 97 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0051 466 Gene3D Phosphorylase Kinase; domain 1 69 174 - -
Lele49g0051 466 SMART serkin_6 97 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0051 466 FunFam Putative LRR receptor-like serine/threonine-protein kinase 66 174 - -
Lele49g0051 466 Pfam Protein tyrosine and serine/threonine kinase 102 370 IPR001245 GO:0004672|GO:0006468
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele49g0051 Lele-ChrLele49 340428 342427 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0051 31 379 Receptor kinase-like Gene Family AT1G51850 40.113 4.44e-77 256
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele49g0051 PK_Tyr_Ser-Thr 1.5e-41 CL0016