Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0048 ATGAAAAATATGTGCCTGGTATCATTTTCTGATTCCTCACAACCAACGGGCAGGGTTGTTTTTGCCTTCACGGGCCACGATCCTGTGGTTGACCTGGAGATTCCAACTCAAAGAAAGCAAGAAAGCGATTGTGTTGAATCAAATAAGACGAAGGAGGTTGTTGTTGTTCCAAGACCACCACCTCCTCCGCCGCCACTTCCAAAATTCGCAGTGTTTTCAAGGCCCAAAGCTGAAGAGAGCGTTACAAAGAGAGAGATTGCCAGATTCTGGAGGCAGAAGCGGATTGAGGAAGAAGAACACCTCCTTGCAGCTATTAAAGCAGCCGCTAAACTCCGAGCTCGCAATCTCACGGAGCAAGACTACTTGATCTTCCAGGAATCCTTGGAGAACGAGAGAGATGAAGACGATGGTCTCCAGAAGAAAAAGCTTATGATCACGGATGCTTGGAAAAGCAAAAATGATGGCCAGGACAAGGAAGTGCGCGTTGGAATAAAGGACTGGTGGACAAAAAGCAAGTACGCATATTTGAACGAACCAGCAGTAGCTTCCATGGAACCTCCAAAGAAGAGAGCCTCTTCTTATATTCCCAACTGTCTGTCTTACAAGCCCAAGCCTTTGTATCCAACCTCCATTGGTTTGTATGTAACAGACACCACCACTGTGTTGAAATGTCAAATTGGTTTGTTAACTTTGTTTTATGTTCCCTCCCCTGTCCCCGTTTCCTGTCTTGAGATTGATATTCAATCTTGCCCTGCAATTCCAGCTCCTCACTTCTCTTGTTTACTCAGATCGGATTCTGAATTCAATCCTTCCAGCTTTGCAATGGCAAAGCCCAAGCACTCTCGCCTACCTCCTCGCAAATCCTCTTCTTCAACTCTCATCCTCTCCTTTACTTTTTTGTTCGCCTTCCTCCTCATTCTTCTTGTATCCTTTGGGATCCTTTCCCTTCCCAGTAGCTCCCGTCTTGATGCACACGTGGCCAACGATCTTAACTCCATTGTTCGGAGCACGCTTGATAAAAGAGAGGGTGAAGAGAGGAGTGAGCAGTGGGTTGAACAAATATCTTGGGAGCCTAGAGCTTTTGTTTATCACAATTTTTTGACAAAGGAGGAATGTGAATACCTAATTAATCTGGCCAAGCCTCATATGCAGAAGTCAACAGTTGTTGATAGCGAAACTGGAAAGAGTAAAGATAGCAGAGTACGTACAAGTTCTGGAACCTTTCTACCCAGAGGACGAGACAAGATTGTGAGGAATATTGAGAAAAGGATTGCTGATTTTACTTTTATTCCTGTAGAGCATGGCGAAGGACTTCAAGTTCTCCACTATGAAGTTGGACAAAAGTATGAGCCTCACTATGACTACTTTCTTGATGAGTTTAACACTAAGAATGGCGCTCAGCGTATAGCTACAGTACTTATGTATCTCACAGATGTTGAAGAAGGGGGTGAGACAGTGTTCCCAGCTGCCAAGGGAAACTTTAGCTCTCTGCCATGGTGGAATGATCTCTCTGAATGTGGAAAGAAAGGACTTTCAATTAAGCCAAAGATGGGTGACGCTCTACTTTTCTGGAGCATGAAGCCTGATGCAACTTTAGATCCCTCTAGTTTGCATGGTGGTTGTCCAGTGATTAAGGGCAATAAATGGTCAAGTACCAAGTGGATGCGCGTCAATGAATACAAAATTTGA 1689 0.4446 MKNMCLVSFSDSSQPTGRVVFAFTGHDPVVDLEIPTQRKQESDCVESNKTKEVVVVPRPPPPPPPLPKFAVFSRPKAEESVTKREIARFWRQKRIEEEEHLLAAIKAAAKLRARNLTEQDYLIFQESLENERDEDDGLQKKKLMITDAWKSKNDGQDKEVRVGIKDWWTKSKYAYLNEPAVASMEPPKKRASSYIPNCLSYKPKPLYPTSIGLYVTDTTTVLKCQIGLLTLFYVPSPVPVSCLEIDIQSCPAIPAPHFSCLLRSDSEFNPSSFAMAKPKHSRLPPRKSSSSTLILSFTFLFAFLLILLVSFGILSLPSSSRLDAHVANDLNSIVRSTLDKREGEERSEQWVEQISWEPRAFVYHNFLTKEECEYLINLAKPHMQKSTVVDSETGKSKDSRVRTSSGTFLPRGRDKIVRNIEKRIADFTFIPVEHGEGLQVLHYEVGQKYEPHYDYFLDEFNTKNGAQRIATVLMYLTDVEEGGETVFPAAKGNFSSLPWWNDLSECGKKGLSIKPKMGDALLFWSMKPDATLDPSSLHGGCPVIKGNKWSSTKWMRVNEYKI 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0048 562 SMART p4hc 358 556 IPR006620 GO:0005506|GO:0016705|GO:0031418
Lele49g0048 562 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 434 557 IPR005123 -
Lele49g0048 562 Pfam 2OG-Fe(II) oxygenase superfamily 438 556 IPR044862 -
Lele49g0048 562 Gene3D q2cbj1_9rhob like domain 350 557 - -
Lele49g0048 562 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 289 556 IPR045054 -
Lele49g0048 562 FunFam Prolyl 4-hydroxylase 4 350 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0048 Lele-ChrLele49 308748 315025 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele55g0211 55 1322323 1324723 Lele49g0048 49 308748 315025 CCT
Lele49g0048 49 308748 315025 Lele51g0054 51 315600 322332 hybridization
Lele49g0048 49 308748 315025 Lele52g0055 52 356008 363558 hybridization