Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0042 ATGGCGATTGAGGAGGACCTTGAGAGCTGTGGAAGTAGAGCTTGTGTACAGTCACCGCATGCTCATCCTCGTCAACATAGGAAGAAATTGGAGGTGTACAATGAGGTGCTCCGTCGAATTCAAGAGTTAAATTGTGAGGATGCCAATGTTCCAGGGTTTGATGACCAGCTTTGGCTTCATTTCAATCGTCTTCCTGCTAGGTACGCATTGGATGTGAATGTGGAGAGGGCAGAAGATGTTCTTAGTCACAAGAGATTGCTCAAGTTGGCAGAGGACCCTGCCAATCGACCTGTATTTCAAGTTCGCTCAGTGCAGGTATATCCTTATGGATTTGCTAATTTTGCTGACTCAACGCATTCCGATCCTTCTGAGAAAGAAGATGCGCAGAGTTCTTTTAACTATTCTTTTAAGCAGGGACTTCATCCACCACCTACTTTTGGTTCTTCTTCTAATCTCGAAGCTCTTTCCCGCCAAGCATGTAAAAATAATGTTGAAGACAGGGATAGGGGTATGAATTCGACACCATGCTTTTACAGGCCCATGCACGAGATTACCTTTTCAACTGTTGACAAGCCTAAAGTCCTTAGTCAGTTAACTTTATTACTTGGGGAGATGGGGCTGAACATTCAAGAAGCTCATGCATTTTCCACTACAGATGGATTTTCTCTCGATGTCTTTGTTGTTGAGGGGTGGCCAAATGAGGAAACTGAGGAGCTTAAACGTGTACTGGAAAAGGAAATTTTGAAGGTTAAGCGGGAGCAACATCTATCAAAACAGGGCTTGCCTTCTGCTGCCATTGAACATTATTGTCAGGCAAGGATGGAACCCTTCGCTCATTGTGTAGAAATACCATCTGATGGAACTGATGTCTGGGAAATTGATACCAGCCAGCTGAAATTTGATAACAAAGTTGGCTCTGGGTCATTCGGTGATTTGTACAGAGGTACTTATTGCAGCCAAGATGTAGCTATCAAAGTCCTTAAGCCTGACAAAATAAATACAGAGATGTTGAGAGAATTTGCCCAGGAAGTTTATATCATGAGGAAAATTCGACACAAGAATGTTGTGCAGTTCATTGGAGCATGCACTCAGTCACCAAATCTGTGTATTGTAACTGAGTTTATGTCTAGGGGAAGCGTCTATGACTTTCTGCACAAACAAAGGGGTGTATTTAAGCTTCCTTCTTTACTAAAAGTAGCAATTGATGTTTCCAAGGGAATGAACTATTTGCACCAAAATAATATAATTCACAGGGACCTCAAGACTGCCAATCTTCTAATGGATGAAAATGAAGTGGTAAAGGTTGCTGATTTTGGGGTTGCCAGAGTGCAAACTCAATCTGGAGTGATGACAGCTGAAACTGGAACATACCGTTGGATGGCTCCTGAGGTCATTGAACACAAACCGTATGACCAGAAGGCAGATGTTTTTAGTTTTGGAATAGCTCTTTGGGAGCTTCTAACAGGAGAACTGCCTTATGCTTACCTGACCCCGTTACAAGCAGCAGTAGGCGTGGTGCAGAAGGGTCTACGACCTTCAATCCCCAAGAATGCACACCCAAGGCTTTGTGAACTGCTCCAGCGATGTTGGCGACAAGATCCAATTGAGAGACCGAACTTCTCAGAAATATTGGAAATTCTTCAGCAGATATCAAAGGAGTGGTCTGATAGCTTGTTTCTGCTTTTTGAAAATTTCGGTTATATTGTACTCTATCTGCCTTGA 1722 0.4297 MAIEEDLESCGSRACVQSPHAHPRQHRKKLEVYNEVLRRIQELNCEDANVPGFDDQLWLHFNRLPARYALDVNVERAEDVLSHKRLLKLAEDPANRPVFQVRSVQVYPYGFANFADSTHSDPSEKEDAQSSFNYSFKQGLHPPPTFGSSSNLEALSRQACKNNVEDRDRGMNSTPCFYRPMHEITFSTVDKPKVLSQLTLLLGEMGLNIQEAHAFSTTDGFSLDVFVVEGWPNEETEELKRVLEKEILKVKREQHLSKQGLPSAAIEHYCQARMEPFAHCVEIPSDGTDVWEIDTSQLKFDNKVGSGSFGDLYRGTYCSQDVAIKVLKPDKINTEMLREFAQEVYIMRKIRHKNVVQFIGACTQSPNLCIVTEFMSRGSVYDFLHKQRGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENEVVKVADFGVARVQTQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGIALWELLTGELPYAYLTPLQAAVGVVQKGLRPSIPKNAHPRLCELLQRCWRQDPIERPNFSEILEILQQISKEWSDSLFLLFENFGYIVLYLP 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0042 573 Gene3D Transferase(Phosphotransferase) domain 1 377 559 - -
Lele49g0042 573 Pfam Protein tyrosine and serine/threonine kinase 298 547 IPR001245 GO:0004672|GO:0006468
Lele49g0042 573 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Lele49g0042 573 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 150 551 - -
Lele49g0042 573 SMART serkin_6 298 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0042 573 ProSiteProfiles ACT domain profile. 183 263 IPR002912 -
Lele49g0042 573 SUPERFAMILY Protein kinase-like (PK-like) 280 547 IPR011009 -
Lele49g0042 573 FunFam Serine/threonine-protein kinase isoform 1 288 376 - -
Lele49g0042 573 PRINTS Tyrosine kinase catalytic domain signature 474 496 IPR001245 GO:0004672|GO:0006468
Lele49g0042 573 PRINTS Tyrosine kinase catalytic domain signature 372 385 IPR001245 GO:0004672|GO:0006468
Lele49g0042 573 PRINTS Tyrosine kinase catalytic domain signature 409 427 IPR001245 GO:0004672|GO:0006468
Lele49g0042 573 PRINTS Tyrosine kinase catalytic domain signature 455 465 IPR001245 GO:0004672|GO:0006468
Lele49g0042 573 PRINTS Tyrosine kinase catalytic domain signature 518 540 IPR001245 GO:0004672|GO:0006468
Lele49g0042 573 CDD ACT_TyrKc 181 248 - -
Lele49g0042 573 Coils Coil 233 253 - -
Lele49g0042 573 ProSiteProfiles Protein kinase domain profile. 298 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0042 573 SUPERFAMILY ACT-like 181 246 IPR045865 -
Lele49g0042 573 CDD STKc_MAP3K-like 304 547 - -
Lele49g0042 573 ProSitePatterns Protein kinases ATP-binding region signature. 304 325 IPR017441 GO:0005524
Lele49g0042 573 Gene3D Phosphorylase Kinase; domain 1 287 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0042 Lele-ChrLele49 271763 279541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0042 1 556 MAP Kinase Kinase Kinase AT4G35780 71.685 0.0 804
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele49g0042 PK_Tyr_Ser-Thr 6.6e-75 CL0016