Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0019 ATGGGAGGTTTATTGCGCATTTTTGAGTTCAATCACGGGATCATGGCCAAGAAAGCTCATGCCCACAAGAGACGTCATGGTGGCCTGGAACCTCCTCGCAATAGCCTGGAGCTTCAAGTTGAAGCATTTCAAATTCAATGCCCGCAAGGAGAATTGCCGTATCATTATCAAGTGGAAGATTTGTCGATAAATACTTGTCATTCAGATGCAATTTCAATAAAGAAACTGATCAATGATGAGCTATGCCAACGACCGACTATCAAACCAAATGCACCGAGCCTTGTGGCAAGATTGATGGGTATAGATATGATGCCATCAGATGCTAAATCTACAGTTCCATCAGATGAAATACAAAGTGAAAATAGGGTGAAGAAGTTTTCAGAGAAGGAAGTGAATGGAAGGGGTTCAGGCGGCCGGGGTTCGGGCTACTCATATTCTTGTGGCCACATGGAATTTGACTCTTATTACCAAGACATGGATGATAATGATGGATGGAACCAATATTTGGGAAAAGCAAAGCCCCGGGAGCATCCCCAGGATGAGGAACTACAGAAGTTCAAGAAAGAATTTGAAGCATTTCGAGCAGCAAGGTTAATGGAGTGTTCAAAGGTTGTTGAAGTTGGCAATATCCCCAGAGAATTGCTTGCACGAGAGAGCATAAGCAAGAAAAAGGTGGCAGATCATGCAACTTCCCATGGGCTGGCTACAGAGTTACCAAATAATGGTGGTCCAGAATATCATGGTAATATCATGGAGTTATTTCCTACTAGGCACAAAGAAACCTTTCCTTCAAGGAGCAGAACCTTAAGTAGAGACTTTGAGGAGTCCTTGATGATGAAATCGAACGGCCAACTGGATGGTTCTTCACCAACTCGAATAGTAATTTTGAAGCCTGGTCCTGATAGGGTTTATAGCCATGAGGATAATTGGATCAATCCATCCAGCACTTTACAAGGGAGAAATAGCATAGAAGATTTTCTCGAAGAGGTCAGAGAGCGGCTAAAATGTGAACTGCAGGGGAAAACTTTTAAAAAGGGTTATGTAATTCGGGGAAGTGGGATTGAGACACCTTACAATGAAAAGCCATCAGATCCTAAACAAATTGCTCGTAATATAGCAAAGCAGGTCAGAGAAAGCGTGACTAGAGATGTTGCAACAAATTTGCTCCGCTCAGAATCAACAAGATCGTACAGAAGTGAAATTCAGTTCAATGGATCAAGTTCCCCAGAATTCATCAATAGGGATACCAGGAGACACTTGTCAGATAGGCTAAGAAATGTTCGAAAAAGCAAAGCTTATATTGATATTCCTGAAATGACTTGTGGGAATTCAAGGTCATATCTCTTAGATAATCACAATGACAGGTTAAAACAGGACAATGATAGTATGAATTCAAATGATTTGAGCCACTGGGGAATTTCGAAAGAGGAAAAAGAAATACAAACAGGCTCTTTCAGGTGTGAACCAGTTTACAATATATCGCTTCCCAAAGACTTGTCCCCTAGAAACCTTGTTAGATCCTTGTCTGCTCCTGTATCAGGAACATCATTTGGAAAGCTTCTTCTTGAGGACCGCCATGTTTTAACTGGTGCCCAAATTCGGAGGAAGCTTGAAGCTATTGAAACTGTGTCTGTTGATGTTAAAAGGAAAAAGAAGGATAGATTTAACATTAAGGAAAAAGTTTCCAACTTTAAATATAATCTTGTCCTAAGAGGGAAGCTGTTTGGAAAAAAAATTCAATCAATGGTTGAATCACATAGCAATGAAGATGGTCCCATGATGGTAGATGTCACGAGTGGACCAACAGTTCTTTTGAAATGTGGTGAGAGCCATGAGAACTCCACTGAGGTTCCTCCCAGTCCTGCATCTGTATGCAGCAATGCTCAGGAAGAGATATGGAAACGAGCTGAATATTTAAGTCCAATTTCAACTCCGGATGTAACTTCAAGAGATGGTAACGCTATGCCAGAGTTTTTTAGAGAAATTAGCTCTGGTTTGAATGAGTTAAGGAGGCAGATAAATCAACTTGAGTCTGATGGCCCTGAAGAATTAATGGTCAAACAGGAGCCTGAAGAATCTGAGTTGTCACAATTAGAGGATCCAGCAGAATTTTACATAAGGGATCTGCTTGTTGCTTCTGGTCTATACTTCGGTTCATGGAATAAATCCTCATTAAAAGGGGACACATTTGCGAAGCCTATTGGGAACTCAGTTTTTGAAGAAGTGGAGGAGTCTCATAAAAAAGTGCTCAAGGAGGACGAAACTTCTACAGAGGATCGACGTGACAATAAGTTAGAGCACAAGCTATTGCATGATTTGCTAAATGAAGCACTCTCCATGGTTCTTGGACCACCTTTGACGTTGTCTGGATTCAGAAGGAAACCATGCAGTTCATCCTCCATGCTGCCGCCGCCACGGGGAAAGGAACTTCTGAAGTTAGTATGGGAAATCATCAGAGTTTCTTTACATCCATCGTCTGACATAACATCTGATTCACTTGATACGTTGGTGGCCAGAGATCTGGGATCCAACAACTGGGTTGGATTGGTAGACGATGAGCTTAATGTACTGGAAAGAGAGATAGAACATCTAGTTACTGAAGATCTGATTGAAGAACTCACAACGGATATGATATGCTCTTAG 2643 0.4147 MGGLLRIFEFNHGIMAKKAHAHKRRHGGLEPPRNSLELQVEAFQIQCPQGELPYHYQVEDLSINTCHSDAISIKKLINDELCQRPTIKPNAPSLVARLMGIDMMPSDAKSTVPSDEIQSENRVKKFSEKEVNGRGSGGRGSGYSYSCGHMEFDSYYQDMDDNDGWNQYLGKAKPREHPQDEELQKFKKEFEAFRAARLMECSKVVEVGNIPRELLARESISKKKVADHATSHGLATELPNNGGPEYHGNIMELFPTRHKETFPSRSRTLSRDFEESLMMKSNGQLDGSSPTRIVILKPGPDRVYSHEDNWINPSSTLQGRNSIEDFLEEVRERLKCELQGKTFKKGYVIRGSGIETPYNEKPSDPKQIARNIAKQVRESVTRDVATNLLRSESTRSYRSEIQFNGSSSPEFINRDTRRHLSDRLRNVRKSKAYIDIPEMTCGNSRSYLLDNHNDRLKQDNDSMNSNDLSHWGISKEEKEIQTGSFRCEPVYNISLPKDLSPRNLVRSLSAPVSGTSFGKLLLEDRHVLTGAQIRRKLEAIETVSVDVKRKKKDRFNIKEKVSNFKYNLVLRGKLFGKKIQSMVESHSNEDGPMMVDVTSGPTVLLKCGESHENSTEVPPSPASVCSNAQEEIWKRAEYLSPISTPDVTSRDGNAMPEFFREISSGLNELRRQINQLESDGPEELMVKQEPEESELSQLEDPAEFYIRDLLVASGLYFGSWNKSSLKGDTFAKPIGNSVFEEVEESHKKVLKEDETSTEDRRDNKLEHKLLHDLLNEALSMVLGPPLTLSGFRRKPCSSSSMLPPPRGKELLKLVWEIIRVSLHPSSDITSDSLDTLVARDLGSNNWVGLVDDELNVLEREIEHLVTEDLIEELTTDMICS 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0019 880 Pfam Domain of unknown function (DUF4378) 705 872 IPR025486 -
Lele49g0019 880 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 878 - -
Lele49g0019 880 Coils Coil 659 679 - -
Lele49g0019 880 Pfam DUF761-associated sequence motif 91 107 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0019 Lele-ChrLele49 126675 130493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0019 73 879 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 39.616 1.06e-149 456
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0019 49 126675 130493 Lele53g1238 53 21026938 21028062 CCT
Lele49g0019 49 126675 130493 Lele54g1210 54 17657816 17658955 CCT
Lele49g0019 49 126675 130493 Lele55g0248 55 1514125 1515249 CCT
Lele49g0019 49 126675 130493 Lele56g0235 56 1885760 1886899 CCT
Lele49g0019 49 126675 130493 Lele51g0021 51 136128 139947 hybridization
Lele49g0019 49 126675 130493 Lele52g0023 52 164013 167781 hybridization