Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele49g0017 | ATGTCCTGCTCCTCGTCGTCAGGGTCCGAGGAGGATGATGAGGGCTTCGAATCCTACAGGAAAGGAGGCTACCATGCCGTCCGAGACGGTGATCAGTTCGCCGGCGGCAGGTACATAGCACAGAGGAAGCTCGGCTGGGGTCAGTTCTCGACTGTGTGGCTTGCTTACGATACTCGCACTTCTACATACGTTGCTCTTAAGATCCAGAAGAGTGCAGCCCAGTTTGCTCAGGCTGCCCTTCACGAGATTAGTGTTCTTTCATCTATTGGTGATGGTGACCCTTCAAATTCAAAGTGTGTTGTCCACTTGATCGATCACTTTAAGCATACAGGTCCAAATGGACAGCACCTTTGTATGGTGCTTGAGTTTCTTGGTGATAGTTTGCTTCGTCTGATCAGATATAACCGTTACAAAGGCCTTCCATTAAATAAAGTTAGGGAGATTTGCAAATGTATTTTGATCGGTCTGGATTACTTGCACAGAGAACTTGGTATAGTCCACACTGATCTAAAACCTGAAAATATTCTTCTCTTTTCTTCTATCGATGCTTCCAAAGACCCTGTCAGATCTGGACTTTCCCCGATCCTGGAGAGACCAGAGGGAAACCCAAATACTGGAGTTACGAGTCTTATTCAGAAAAGGTTAAAAAGGAGGGCAAGGAGGGCAGTTGCTAAGATATCTGAAAAGCGTGCTTCAATGGGAGGAGCAGGACAGGCTCGGAAGTCTGAAAGAAATGTTGAAGGGATTGATGTGAGATGCAAGATAGTAGATTTTGGAAATGCATGTTGGGCTGATAAGAAAATTGCTGAAGAAATCCAGACAAGGCAGTACAGGGCACCTGAAGTAATATTGCAGGCTGGTTATTCTTTCTCTGTTGACATGTGGTCTTTTGCTTGCACTGCTTTTGAACTTGCCACTGGTGATATGATGTTTACCCCAAAAGGTGGACAAGACTTTAGTGAAGATGAGGATCACCTAGCGATGATGATGGAACTTCTTGGGAAAATGCCCCGTAGGGTGGCAATATCTGGAACACGATCCAAGGATTATTTTGATAGGCATGGGGATCTAAAACGGATTCGGAGGCTAAAATTCTGGCCGTTTGATAAATTGTTGATTGATCGATACAAATTTTCAGAGAATGATGCGAGGGAGTTCTCAGGCTTTCTTCTGCCGCTTCTTGATTTTGCACCAGAGAACCGGCCAACAGCCCAGCAGTGCTTGCAACACCCTTGGTTTAGTGGCAAGGATTCAACTCCACGCGAAAAGGGGATTGAGCCTGGTGTGGAGAAGGTTAATGTCGGGATGAGTAACCTTAAAATCAAGGTGGGAAAGTGA | 1338 | 0.4567 | MSCSSSSGSEEDDEGFESYRKGGYHAVRDGDQFAGGRYIAQRKLGWGQFSTVWLAYDTRTSTYVALKIQKSAAQFAQAALHEISVLSSIGDGDPSNSKCVVHLIDHFKHTGPNGQHLCMVLEFLGDSLLRLIRYNRYKGLPLNKVREICKCILIGLDYLHRELGIVHTDLKPENILLFSSIDASKDPVRSGLSPILERPEGNPNTGVTSLIQKRLKRRARRAVAKISEKRASMGGAGQARKSERNVEGIDVRCKIVDFGNACWADKKIAEEIQTRQYRAPEVILQAGYSFSVDMWSFACTAFELATGDMMFTPKGGQDFSEDEDHLAMMMELLGKMPRRVAISGTRSKDYFDRHGDLKRIRRLKFWPFDKLLIDRYKFSENDAREFSGFLLPLLDFAPENRPTAQQCLQHPWFSGKDSTPREKGIEPGVEKVNVGMSNLKIKVGK | 445 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele49g0017 | 445 | PANTHER | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED | 8 | 221 | - | - | |
Lele49g0017 | 445 | ProSitePatterns | Protein kinases ATP-binding region signature. | 44 | 67 | IPR017441 | GO:0005524 | |
Lele49g0017 | 445 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 165 | 177 | IPR008271 | GO:0004672|GO:0006468 | |
Lele49g0017 | 445 | FunFam | Serine/threonine-protein kinase SRPK | 117 | 413 | - | - | |
Lele49g0017 | 445 | SUPERFAMILY | Protein kinase-like (PK-like) | 32 | 419 | IPR011009 | - | |
Lele49g0017 | 445 | CDD | STKc_SRPK | 27 | 413 | - | - | |
Lele49g0017 | 445 | SMART | serkin_6 | 38 | 413 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lele49g0017 | 445 | FunFam | Protein kinase superfamily protein | 24 | 123 | - | - | |
Lele49g0017 | 445 | ProSiteProfiles | Protein kinase domain profile. | 38 | 413 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lele49g0017 | 445 | Gene3D | Phosphorylase Kinase; domain 1 | 24 | 123 | - | - | |
Lele49g0017 | 445 | Pfam | Protein kinase domain | 252 | 413 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lele49g0017 | 445 | Pfam | Protein kinase domain | 39 | 178 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lele49g0017 | 445 | Gene3D | Transferase(Phosphotransferase) domain 1 | 92 | 413 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele49g0017 | Lele-ChrLele49 | 109051 | 112204 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele49g0017 | 4 | 433 | EF-hand Containing Proteins | AT5G22840 | 48.133 | 1.17e-165 | 475 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_SRPK | Lele49g0017 | Pkinase | 2.6e-22 | CL0016 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele49g0017 | 49 | 109051 | 112204 | Lele49g0017 | 49 | 109051 | 112204 | ECH | |
Lele49g0017 | 49 | 109051 | 112204 | Lele51g0019 | 51 | 119064 | 122219 | hybridization | |
Lele49g0017 | 49 | 109051 | 112204 | Lele52g0021 | 52 | 141668 | 145131 | hybridization |