Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0014 ATGGAAAATTCTTGCGCATCCATGTTATCAGATTCTCAAGCATTAATCATTCCGAGTGACAGAATAAAAGCAAACGTTTCTTCTTCCTGGCGGTGTTACGTCCTGTCAGATCAGATCCAATCAATTAGCTTCATGCTTATGATTATCCGGCTGCGATTCGTAGAGAGCCGTATCTCCCTCCCAGCCACTACCAGCGCAGGCACAGGTGGAACGCCATCTTCCACTCCGGCTTTGAATTTCTCTGGGAACAGCGTTAAACGCTGCAACATTGTAGAATACATGCCGCCGAAACCTGAGTCCGCTACAAAGTCAAACCCCTACTTCAAACCCGGTTCCGCCGTCGAGGTATGCTCTGACGATGAAGGATTTCGCGGATCTTGGTTTGCTGGCACCATTATTCGCCGCTGCGCTTCCAAGAAAAACCAGAACAAATTCTTGGTGGAGTATAAAACCATCATGGCCGACGAGAATGGTTCTAAACCCCTGAGAGAGATGCTGGACCTTCACCAGCTTCGACCCGTCGCCCCAAGGGAGACTGACCGCCAATTCAAGTTTGGCGAGGAGGTCGATGCATACCAAAATGATGGTTGGTGGGAAGGCTCCATAACCCAAGAATTGGGAAACGGGAGGTTCACGGTGTATTTCAAGCCCTCAAAGGAGCAGACTGAGTTCGGGAAGGAGGACCTTAGGCTTCATCGCGAGTGGGTCAATGGGAATTGGGTCCCTCCATTGGAAGAACCGTCGGAGGAAAAGAAAAATTTGACAAACGATGTGAAGGCTAGTGAAGAAACAGTGACGGACATGTTTAGCAAGGGGACACATGTTGAGGTTAGCAGTGATGAGGAAGGTTTTGAAGGAGCTTGGTTTGCTGCTACTATTGTTGAACCAAAGGGAAAGCATAAATTTCTTGTTGAGTACCTGAACCTACGGACTGATGATGATTCAGAGTTTTTGAAAGAGGAAGTTGATATCTTACATATTCGGCCTTATCCACCAGAACATGTTTGTGATCAGTTTAAACTTCTTCAAGAAGTTGATGCTTTTTACACTGACGGATGGTGGGTTGGAGTGATTTCCAAAGTTCTTAGCAACTCAAGGTATGTAGTATACTTCAGGGACACTAATGAAGAATTAGAGTTTCCACACTCTGAGTTAAGGCTACATCAGGACTGGGTCAAGGGAAAATGGTTCATTGCTTCTAAGGCATTGAATCTGTAG 1218 0.4631 MENSCASMLSDSQALIIPSDRIKANVSSSWRCYVLSDQIQSISFMLMIIRLRFVESRISLPATTSAGTGGTPSSTPALNFSGNSVKRCNIVEYMPPKPESATKSNPYFKPGSAVEVCSDDEGFRGSWFAGTIIRRCASKKNQNKFLVEYKTIMADENGSKPLREMLDLHQLRPVAPRETDRQFKFGEEVDAYQNDGWWEGSITQELGNGRFTVYFKPSKEQTEFGKEDLRLHREWVNGNWVPPLEEPSEEKKNLTNDVKASEETVTDMFSKGTHVEVSSDEEGFEGAWFAATIVEPKGKHKFLVEYLNLRTDDDSEFLKEEVDILHIRPYPPEHVCDQFKLLQEVDAFYTDGWWVGVISKVLSNSRYVVYFRDTNEELEFPHSELRLHQDWVKGKWFIASKALNL 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0014 405 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 260 400 - -
Lele49g0014 405 Pfam Agenet domain 111 176 IPR008395 -
Lele49g0014 405 Pfam Agenet domain 186 244 IPR008395 -
Lele49g0014 405 Pfam Agenet domain 272 332 IPR008395 -
Lele49g0014 405 Gene3D - 94 185 - -
Lele49g0014 405 Gene3D - 259 340 - -
Lele49g0014 405 SMART agenet_At_2 106 179 IPR014002 -
Lele49g0014 405 SMART agenet_At_2 267 335 IPR014002 -
Lele49g0014 405 SMART agenet_At_2 337 393 IPR014002 -
Lele49g0014 405 SMART agenet_At_2 181 237 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0014 Lele-ChrLele49 97577 102051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0014 279 397 PHD Transcription Factor Family AT5G58610 29.730 4.01e-11 63.2