Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele49g0011 | ATGACTCGAACGCTTCGATTTCTCAATTCTCTCGACACCGTCTCCGCCGCTCCCCCTCCCGAGGCCGTTGCCGTCGAATCCGACTTCGTCGTTATTCTCGCCGCACTCCTCTGCGCCCTCATATGCGTCGTAGGCCTCATCGCCGTCGCCCGCTGCACCTGGCTCCGCCGCGGATCCGGCGCCTCCGCCTCCCCCGCTCGGGCTCTGGCCAACAAGGGTCTCAAGAAGAAAGTCCTGCAATCGCTCCCCAGATTCACCTATGTTGACGGCAGTCCGCACAAGTGGGTGGCCACATCGGAGTGCGCGATTTGCCTGGCGGAGTTCGCCGAGGGCGACGAGATCCGGGTGCTCCCTCAGTGCGGGCACGGTTTTCACGTGGCCTGCATCGACACGTGGCTGGGGTCCCACTCTTCGTGCCCTTCTTGTCGGCAGATTCTGGCGGTGGCCAGGTGCCAGAGGTGCGGCCAGTACCCGGCGGTAGGAGGCGGGGGATCGGCCGGAGCAGCAAGCAGCTCGTCCGGCGAACCTGAGCTGAAGTCCAGGGAGGATGACAATGCCGCCGCCAATAACAACATAAGCGGCGGGATTAATAGTAATTTCTTGCCTTGA | 609 | 0.6305 | MTRTLRFLNSLDTVSAAPPPEAVAVESDFVVILAALLCALICVVGLIAVARCTWLRRGSGASASPARALANKGLKKKVLQSLPRFTYVDGSPHKWVATSECAICLAEFAEGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILAVARCQRCGQYPAVGGGGSAGAASSSSGEPELKSREDDNAAANNNISGGINSNFLP | 202 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele49g0011 | 202 | MobiDBLite | consensus disorder prediction | 161 | 202 | - | - | |
Lele49g0011 | 202 | ProSiteProfiles | Zinc finger RING-type profile. | 101 | 143 | IPR001841 | - | |
Lele49g0011 | 202 | CDD | RING-H2_PA-TM-RING | 100 | 143 | - | - | |
Lele49g0011 | 202 | SMART | ring_2 | 101 | 142 | IPR001841 | - | |
Lele49g0011 | 202 | FunFam | E3 ubiquitin-protein ligase ATL6 | 62 | 149 | - | - | |
Lele49g0011 | 202 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 62 | 148 | IPR013083 | - | |
Lele49g0011 | 202 | PANTHER | RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED | 21 | 155 | - | - | |
Lele49g0011 | 202 | Pfam | Ring finger domain | 100 | 143 | IPR001841 | - | |
Lele49g0011 | 202 | SMART | FANCL_C_2 | 97 | 151 | - | - | |
Lele49g0011 | 202 | MobiDBLite | consensus disorder prediction | 185 | 202 | - | - | |
Lele49g0011 | 202 | SUPERFAMILY | RING/U-box | 79 | 148 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele49g0011 | Lele-ChrLele49 | 83601 | 84209 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele49g0011 | 1 | 154 | C3H Transcription Factor Family | AT1G20823 | 63.636 | 8.80e-64 | 194 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele49g0011 | 49 | 83601 | 84209 | Lele49g0011 | 49 | 83601 | 84209 | ECH | |
Lele49g0011 | 49 | 83601 | 84209 | Lele51g0013 | 51 | 88367 | 88984 | hybridization | |
Lele49g0011 | 49 | 83601 | 84209 | Lele52g0012 | 52 | 99346 | 99963 | hybridization |