Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0008 ATGGATTCCGCCGTCGAGGGCACGCCTAGGTATTACGGGCTCTGCGCCATTGGAGGAATGCTCAGTGCTGGCACTACCCATCTCGCCACCACTCCTTTTGACGTCCTAAAAGTAAATATGCAGGTGCACCCAATTAAATATTACAGCATTTCCTCGTGCTTTACTACTATATTAAGAGAACAAGGTCCTTCTGCCCTCTGGAGAGGTTGGGCCGGCAAGTTCTTTGGATATGGGGCTCAAGGGGGCTGCAGATTTGGACTGTATGAATATTTCAAGGGACTTTATTCCAATATAATGGGAGACTGTGATAGGAGTGTGATTTATTTTGTTAGTAGCGCATCTGCTGAAGTATTTGCCAATATAGCTCTATGCCCTTTTGAAGCTGTTAAAGTGAGAGTGCAGGCACAGCCATGTTTTGCAAAGGGGCTGTTTGATGGCTTTCCAAAGTTGTATGCATCCGAAGGCACATATGGATTCTACCGTGGGCTTATTCCACTTTGGGGCCGAAACCTTCCATTTTCTGTGGTTATGTTCTCAACATTCGAGCATTCTGTTGATTTATTGTATCGTAAAGTTGTTAAGAAAAGAAAAGAGGATTGCTCAATAACTCAACAACTCGGGGTGACATGTTTAGCTGGATATGCTGCTGGGTCTGTTGGTAGCTTGATTTCGAACCCAGCAGACAATATTGTAGCTTCGCTTTATAACAGAAAGGCTGATAGTCTTATGCTGGCTATCAGGAAAATTGGTCTAACCAATCTATTTACGAGGAGCCTTCCTATTAGAATTCTTCTGGTTGGCCCTTCTATAACTATGCAATGGTTGTTTTATGACACAATTAAAGTTATTGGTGGTCTGCCAACTAGTGGTGAAGTCGTGACTGACTCGGAAAGAAACGAGCAGAAGAATGTAATGAGAAACTTTAGCAGCAATGCTCGAGTTGGCAATTTTTCTGTTCGTGTGGCATTTATGTGTCATGGTCTCGTAATGCTCTCAATGAACATTTCTGCACTGAAGCCGAGGAGAGGTTGTCTTTCCATAGTTGCATAG 1050 0.4343 MDSAVEGTPRYYGLCAIGGMLSAGTTHLATTPFDVLKVNMQVHPIKYYSISSCFTTILREQGPSALWRGWAGKFFGYGAQGGCRFGLYEYFKGLYSNIMGDCDRSVIYFVSSASAEVFANIALCPFEAVKVRVQAQPCFAKGLFDGFPKLYASEGTYGFYRGLIPLWGRNLPFSVVMFSTFEHSVDLLYRKVVKKRKEDCSITQQLGVTCLAGYAAGSVGSLISNPADNIVASLYNRKADSLMLAIRKIGLTNLFTRSLPIRILLVGPSITMQWLFYDTIKVIGGLPTSGEVVTDSERNEQKNVMRNFSSNARVGNFSVRVAFMCHGLVMLSMNISALKPRRGCLSIVA 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0008 349 Pfam Mitochondrial carrier protein 107 191 IPR018108 -
Lele49g0008 349 Pfam Mitochondrial carrier protein 16 96 IPR018108 -
Lele49g0008 349 FunFam Mitochondrial phosphate carrier protein 1, mitochondrial 13 284 - -
Lele49g0008 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 204 283 IPR018108 -
Lele49g0008 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 94 IPR018108 -
Lele49g0008 349 SUPERFAMILY Mitochondrial carrier 13 279 IPR023395 -
Lele49g0008 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 187 IPR018108 -
Lele49g0008 349 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 7 292 IPR044677 GO:0005315|GO:1990547
Lele49g0008 349 Gene3D Mitochondrial carrier domain 15 283 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0008 Lele-ChrLele49 70200 74713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0008 8 292 Chloroplast and Mitochondria Gene Families AT2G17270 67.719 8.77e-152 427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0008 49 70200 74713 Lele49g0008 49 70200 74713 ECH
Lele49g0008 49 70200 74713 Lele51g0011 51 74819 79038 hybridization
Lele49g0008 49 70200 74713 Lele52g0010 52 87542 89868 hybridization