Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0002 ATGAATGTATCCGCGTCAAATTCAGATACTTCTTGTACAATCTCTTCGTCTACGATGATCATTTCTGCTGATACAGCTGAGCCTCCTCCTCCGCCTGATTCTGTTAACACCTCCGCCGTCAACAGTTCTACTACCTCTCCTTTCAACTGTGACCAGAACCTCCATCTCTCATCTGCATCTTCATCGCCGCCTCCAGAACTCCAACTACCTATATCGTGGCCCCAGGATGGGAAGCTCAGCCTCGATTGGATCTATAATCTTATGGCTTGCTTCGACTGGTCTTCCAAGAACCTCCCTCCCTCAGAATTTCCTTCTGTTTTGCCGGTTCATGTCTTCGACTCTCTTATCCTTGTCGCTTCCAAGATGCTTCACAAAGAACCTAACTGTGTATCTGTAGACCCCTTTCAACCTAATTCCGACTCCGGGGACCGAGCTGCTTCCGCAGTTGTCGTTGTGGGGGACGTTCATGGCCAATTGCATGATCTATTGTTCCTCCTCAGAGATGCTGGTTATCCTTCACAAAATCGCATATTTGTCTTTAATGGTGATTATGTTGACAGAGGAGCTTGGGGTCTGGAAACTTTCTTACTCTTGTTGGCTTGGAAGGTGTTTATGCCACATACTGTGTATCTACTTCGCGGGAATCATGAATCAAAATACTGTACATCTGTTTATGGCTTTGAGAAGGAAGTTATGACAAAGTACAGTGATAAAGGTAAGCATGTATATCGGAAATGTTTGGGATGCTTTGAAGGTCTTCCTTTGGCATCTATTATAGCTGGACGTGTATACACAGCTCATGGAGGACTTTTCCGCAGTGTAACTGTGACACCATCAAAGAGATTAAAAGGAAAGAGAAACCGTAAGAATTATTCCAACCCTGATGCTAAAACCTTGTCTCTTGGTTCATTGGAGGAATTATCTAAGGCTCGGCGATCAGTTCTTGATCCTCCTTGGGAAGGTTCAAACCTGATTCCTGGTGATGTTTTGTGGTCTGATCCTTCGAAAACTCCTGGTCTTGCTCCAAACAAAGAAAGAGGCATTGGCTTATTGTGGGGTCCTGATTGTACTGAGGAATTTTTGAAGAAGTATCAGCTAAAGTTTATCATTAGGTCACATGAAGGTCCTGATGCAAGGGAAAAGAGGGATGGTTTTGATGGAATGGATGAAGGTTACACTATCGATCATATTGTGGAGTCTGGAAAGATGATCACCCTTTTCAGTGCTCCAGATTACCCACAATTTCAGGCAACAGATGACAGGTATAATAACAAAGCGGCTTATGTTGTCCTTGAACCCCCACATTTTGACAATCCAGTATTTCATTGCTTTGAAGCAGTTACACCGAGGCCCAAGGTGAATGCTTATTATGATTATGAAGAGGTGATAGACTCGGATGAAGAATTGGACTTGGCATCCATGGTGACTGCCTGA 1434 0.44 MNVSASNSDTSCTISSSTMIISADTAEPPPPPDSVNTSAVNSSTTSPFNCDQNLHLSSASSSPPPELQLPISWPQDGKLSLDWIYNLMACFDWSSKNLPPSEFPSVLPVHVFDSLILVASKMLHKEPNCVSVDPFQPNSDSGDRAASAVVVVGDVHGQLHDLLFLLRDAGYPSQNRIFVFNGDYVDRGAWGLETFLLLLAWKVFMPHTVYLLRGNHESKYCTSVYGFEKEVMTKYSDKGKHVYRKCLGCFEGLPLASIIAGRVYTAHGGLFRSVTVTPSKRLKGKRNRKNYSNPDAKTLSLGSLEELSKARRSVLDPPWEGSNLIPGDVLWSDPSKTPGLAPNKERGIGLLWGPDCTEEFLKKYQLKFIIRSHEGPDAREKRDGFDGMDEGYTIDHIVESGKMITLFSAPDYPQFQATDDRYNNKAAYVVLEPPHFDNPVFHCFEAVTPRPKVNAYYDYEEVIDSDEELDLASMVTA 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0002 477 PRINTS Serine/threonine phosphatase family signature 178 205 IPR006186 GO:0016787
Lele49g0002 477 PRINTS Serine/threonine phosphatase family signature 211 235 IPR006186 GO:0016787
Lele49g0002 477 PRINTS Serine/threonine phosphatase family signature 248 274 IPR006186 GO:0016787
Lele49g0002 477 PRINTS Serine/threonine phosphatase family signature 308 335 IPR006186 GO:0016787
Lele49g0002 477 PRINTS Serine/threonine phosphatase family signature 148 175 IPR006186 GO:0016787
Lele49g0002 477 PRINTS Serine/threonine phosphatase family signature 402 418 IPR006186 GO:0016787
Lele49g0002 477 FunFam Serine/threonine-protein phosphatase 91 472 - -
Lele49g0002 477 Pfam Calcineurin-like phosphoesterase 149 376 IPR004843 GO:0016787
Lele49g0002 477 MobiDBLite consensus disorder prediction 22 46 - -
Lele49g0002 477 Gene3D - 104 470 IPR029052 -
Lele49g0002 477 SUPERFAMILY Metallo-dependent phosphatases 102 452 IPR029052 -
Lele49g0002 477 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 54 474 - -
Lele49g0002 477 SMART pp2a_7 107 451 IPR006186 GO:0016787
Lele49g0002 477 CDD MPP_PP7 73 458 IPR041754 -
Lele49g0002 477 ProSitePatterns Serine/threonine specific protein phosphatases signature. 212 217 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0002 Lele-ChrLele49 21724 26256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0002 70 367 Calmodulin-binding Proteins AT5G63870 71.906 3.76e-161 456