LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele48g1429	ATGTTTTCGAGACTAATACATCCTCACGAAGGGACATTTTGTCAAGAAAATATGCAGGGTGGATTGAACCACAGTCATCTTGGAGACCCATGTCTTGTCCTGACTGCTGATCCCAAACCTCGTCTTCGTTGGACTGCTGACCTTCACGAGCGATTTGTTGATGCTGTCAGTCAGCTTGGAGGTGCCAGTAAAGCTACACCAAAAGCAATCATGCGGACCATGAATGTCAAGGGTTTGACTCTTTATCATTTAAAGAGTCATCTACAGAAATACAGACTTGGCAAGCAATCAGGAAAAGATACTGGAGGGGGATTCAAAGATGGAATATCTGCTTCATATCTTTTAGAAAGCCCTGGTGACTCTGCTCCAAAGTTGCCAGCTTCTGATGCAAATGATTACTGTGTGATTTCTAGAGGTCACGAAGTCAAGGAAGCATTAAGAGCACAAATGGAAGTGCAAAGTAAACTGCACTTGCTAGTCGAGGCAGAAAAGCACTTGCAGATACGCCAGGATGCAGAGAGGAAATACATGGCCATGCTTGAGAGAGCTTGTAAGATGTTAGCTGATCAATTTATTGGTGCTACAGTAATAGACACAGACAACCAAAAATTTCAAGGCATGGGGAATAAAACATCGAAATCTTCTATGCTTGATCCCGTCGGCTTTTGCCCCTTACCATCCACTGAGGCAACCGGAGTGCATGTTCCACAAGCACAGCCTAGTTTCCAGCAGCAGCGGGGTGACTGTTCCACCGAAAGCTGCTTGACATCACTTGAAAGCCTCGGAGGGTTGACTCTGGAAGGATCTCCTGGTGGATCTAAAAAGAGGATTCTGAGCTTGGATTCAATGGTGGCGCCTCTGATCTGGAGTGAAGCCAATATGAGAACTCAAGGCGTTCATCTAGCCCAAGTTAATCCTCATGGAATAACTAGGGGTTGTCTAAAGTTAATTGAAGTTGTGATTTTTGGTTGTTGGATTGTTGGGACTGTGCAGATCATGCTGTGGTTAATCTGCCGATCTCTGGCCTTAGCCATGGGCATGATCAGCACCATCACAAAAAATCCATCGGTTGAAAACGTTTCAGAAATTGCAGACATGCCCTACTTAAGGGGATCTGTTTACTTTCATTTGTGCGATTTAGGATCAGTATCTTTGCCGTTCGAAGTGGTAACAGAGTTGGAACGAACTTTTCACGGTATATAA	1203	0.4456	MFSRLIHPHEGTFCQENMQGGLNHSHLGDPCLVLTADPKPRLRWTADLHERFVDAVSQLGGASKATPKAIMRTMNVKGLTLYHLKSHLQKYRLGKQSGKDTGGGFKDGISASYLLESPGDSAPKLPASDANDYCVISRGHEVKEALRAQMEVQSKLHLLVEAEKHLQIRQDAERKYMAMLERACKMLADQFIGATVIDTDNQKFQGMGNKTSKSSMLDPVGFCPLPSTEATGVHVPQAQPSFQQQRGDCSTESCLTSLESLGGLTLEGSPGGSKKRILSLDSMVAPLIWSEANMRTQGVHLAQVNPHGITRGCLKLIEVVIFGCWIVGTVQIMLWLICRSLALAMGMISTITKNPSVENVSEIADMPYLRGSVYFHLCDLGSVSLPFEVVTELERTFHGI	400

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele48g1429	400	Pfam	MYB-CC type transfactor, LHEQLE motif	141	186	IPR025756	-
	Lele48g1429	400	TIGRFAM	myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class	39	94	IPR006447	GO:0003677
	Lele48g1429	400	Gene3D	-	38	96	-	-
	Lele48g1429	400	SUPERFAMILY	Homeodomain-like	39	95	IPR009057	-
	Lele48g1429	400	FunFam	Myb family transcription factor	38	96	-	-
	Lele48g1429	400	PANTHER	MYB FAMILY TRANSCRIPTION FACTOR PHL11	13	260	IPR044848	GO:0003700
	Lele48g1429	400	Pfam	Myb-like DNA-binding domain	42	92	IPR001005	-
	Lele48g1429	400	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	36	96	IPR017930	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele48g1429	Lele-ChrLele48	18116469	18119693	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele48g1429	8	258	G2-like Transcription Factor Family	AT3G24120	42.803	1.82e-56	186

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GARP-G2-like	Lele48g1429		Myb_DNA-binding	8.8e-07	CL0123