Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1427 ATGGCTCTCCCCATCCTTCTCTTCCTCCTCCTCTCCCTTCCTCTCGCTTCCGCCAGCGGCCACCATCTCACCCTCGACTACTACGCCCGCACGTGCCCCACCTTCCAGGCCATCGTCAGGGACAACGTCTTCACCAAGCAGAGCGCCGTCCCCTCCACCGCCGCCGGCGTCCTCCGCCTCTTCTTCCACGACTGCTTCACCGACGGCTGTGACGCCTCCCTCCTCATCAGCTCCAACGGCTACGCCAGGGGCGAGCGCGACGCCGTCCCCAACCAATCCCTCTCCGGGGACGCCTTCGACATCATCGTCAAGATAAAAAACGCCCTGGAGCTCACGTGCCCTGGCGTCGTCTCCTGCTCCGACATCGTGGCCCAGACCACCCGGGACCTGGTCAAGATGGTGGGTGGTCCTTACTACGACGTGTTGCTGGGGCGAAAGGACAGCCTCGTATCCAACATCTCGAAGCCCAACGAGACCCTTCCAGAGGCCACCATGTCGATGGACCAGATCATTTTCCAATTCACGGCGAAAGGATTCAGCATCAGGGAGATGGTGGCTCTCACGGGGGCACACACCATAGGCTTCACGCACTGCAAGGAGTTCAGCCGCAGGATCTACAACTTCAGCGCCACGTCGGAGACGGACCCCACCATGAACCCGAAGCTGGTGGCCGGGCTGAAGAAGCTGTGCGAGAACTACACGGAGGACTGGAGCATGGCGGCCTTCAACGACTTGAGGTCGCCGAGCAAGTTCGACAACGCGTACTACCAGAACATCCTGAATGGGCTGGGCCTACTGACGACGGACTATATGATGAGCGCCGACCCAAGAACGAGGCCCATCGTGGAGGTGTATGCGGACAATCAGACGGCGTTCTTCGAGGACTTCGCGGCCGCCATGCACAAGCTGTCGACGCACCAAGTGAAGACCGGGAAGAAGGGAGAGGTGAGGCTGAGGTGTGACCAGTTCAACAACGTTCCCATAGTTCAAACCCTCAACAACATGACCCATCTTCGCTCTTCTTTCCGGCTCTCAATTCTATCGAAAAGTCTCAGTCTCACCAAATCCCACCACTTTACTTTTCGAACTCTTAATAGAACCCATAATGCTAGGATATCTTGCTCTATTGCGCCAAAGTATGCTCCTTATCCCACCGCTACTGCGGAAGCAGAGACAAGATCCTGGAAGAAACTAATTAACATTGCAGTATCAGGTGCTGCTGGAATGATTTCTAATCATCTTCTTTTCAAGCTTGCATCTGGTGAGGTATTTGGTCCTGACCAACCTATCGCACTGAAATTATTGGGATCTGAAAGATCATTCCAAGCTCGTGAAGGAGTTGCGATGGAGCTGGAGGACTCATTGTTTCCATTATTGAGGGAGATGAGCATTGGGATTGATCCGTATGAGATGAGAATAGAGCTAAATGTCAGGAGTATTAACAACTGGCAAGTTGGAGCATCTCTAGAACTGTGTTTTCTGGGAATAAAATTTAAGAGAGGTGGTGTGCTTATTCAAAAGTGGGGAAGATCATCAGCTGCATCAACTGCTGTGTCAATTGTTGATGCCATACGGTCTTTAATCACTCCTATTCCTGAGGGAGATGGTGATTATGAGCTTGTCAAGGATGTCATATTTGATGACTATCTTCTGCAGCGAATAGCTAAGATGGATAAGAGGCGTGTGGCTCACCTAACGGGCGAGTTTAAGTCTATCAAATCTAGCTGTACGAATTACAATGAACAAATACATAAGAGCACCGCGTAG 1767 0.5263 MALPILLFLLLSLPLASASGHHLTLDYYARTCPTFQAIVRDNVFTKQSAVPSTAAGVLRLFFHDCFTDGCDASLLISSNGYARGERDAVPNQSLSGDAFDIIVKIKNALELTCPGVVSCSDIVAQTTRDLVKMVGGPYYDVLLGRKDSLVSNISKPNETLPEATMSMDQIIFQFTAKGFSIREMVALTGAHTIGFTHCKEFSRRIYNFSATSETDPTMNPKLVAGLKKLCENYTEDWSMAAFNDLRSPSKFDNAYYQNILNGLGLLTTDYMMSADPRTRPIVEVYADNQTAFFEDFAAAMHKLSTHQVKTGKKGEVRLRCDQFNNVPIVQTLNNMTHLRSSFRLSILSKSLSLTKSHHFTFRTLNRTHNARISCSIAPKYAPYPTATAEAETRSWKKLINIAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSFQAREGVAMELEDSLFPLLREMSIGIDPYEMRIELNVRSINNWQVGASLELCFLGIKFKRGGVLIQKWGRSSAASTAVSIVDAIRSLITPIPEGDGDYELVKDVIFDDYLLQRIAKMDKRRVAHLTGEFKSIKSSCTNYNEQIHKSTA 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1427 588 Gene3D - 396 477 - -
Lele48g1427 588 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele48g1427 588 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele48g1427 588 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele48g1427 588 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele48g1427 588 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele48g1427 588 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 392 471 IPR036291 -
Lele48g1427 588 CDD secretory_peroxidase 22 323 IPR033905 GO:0004601|GO:0042744
Lele48g1427 588 Gene3D Peroxidase, domain 2 161 303 - -
Lele48g1427 588 ProSiteProfiles Plant heme peroxidase family profile. 22 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele48g1427 588 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele48g1427 588 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele48g1427 588 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele48g1427 588 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele48g1427 588 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele48g1427 588 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele48g1427 588 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele48g1427 588 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele48g1427 588 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele48g1427 588 Pfam Peroxidase 49 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele48g1427 588 SUPERFAMILY Heme-dependent peroxidases 23 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele48g1427 588 FunFam Malate dehydrogenase [NADP] 396 484 - -
Lele48g1427 588 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
Lele48g1427 588 FunFam Peroxidase 26 170 - -
Lele48g1427 588 FunFam Peroxidase 161 303 - -
Lele48g1427 588 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Lele48g1427 588 PANTHER - 5 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele48g1427 588 Gene3D - 26 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1427 Lele-ChrLele48 18091075 18099504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1427 5 328 Peroxidase AT5G47000 56.481 5.48e-128 377