LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele48g1427	ATGGCTCTCCCCATCCTTCTCTTCCTCCTCCTCTCCCTTCCTCTCGCTTCCGCCAGCGGCCACCATCTCACCCTCGACTACTACGCCCGCACGTGCCCCACCTTCCAGGCCATCGTCAGGGACAACGTCTTCACCAAGCAGAGCGCCGTCCCCTCCACCGCCGCCGGCGTCCTCCGCCTCTTCTTCCACGACTGCTTCACCGACGGCTGTGACGCCTCCCTCCTCATCAGCTCCAACGGCTACGCCAGGGGCGAGCGCGACGCCGTCCCCAACCAATCCCTCTCCGGGGACGCCTTCGACATCATCGTCAAGATAAAAAACGCCCTGGAGCTCACGTGCCCTGGCGTCGTCTCCTGCTCCGACATCGTGGCCCAGACCACCCGGGACCTGGTCAAGATGGTGGGTGGTCCTTACTACGACGTGTTGCTGGGGCGAAAGGACAGCCTCGTATCCAACATCTCGAAGCCCAACGAGACCCTTCCAGAGGCCACCATGTCGATGGACCAGATCATTTTCCAATTCACGGCGAAAGGATTCAGCATCAGGGAGATGGTGGCTCTCACGGGGGCACACACCATAGGCTTCACGCACTGCAAGGAGTTCAGCCGCAGGATCTACAACTTCAGCGCCACGTCGGAGACGGACCCCACCATGAACCCGAAGCTGGTGGCCGGGCTGAAGAAGCTGTGCGAGAACTACACGGAGGACTGGAGCATGGCGGCCTTCAACGACTTGAGGTCGCCGAGCAAGTTCGACAACGCGTACTACCAGAACATCCTGAATGGGCTGGGCCTACTGACGACGGACTATATGATGAGCGCCGACCCAAGAACGAGGCCCATCGTGGAGGTGTATGCGGACAATCAGACGGCGTTCTTCGAGGACTTCGCGGCCGCCATGCACAAGCTGTCGACGCACCAAGTGAAGACCGGGAAGAAGGGAGAGGTGAGGCTGAGGTGTGACCAGTTCAACAACGTTCCCATAGTTCAAACCCTCAACAACATGACCCATCTTCGCTCTTCTTTCCGGCTCTCAATTCTATCGAAAAGTCTCAGTCTCACCAAATCCCACCACTTTACTTTTCGAACTCTTAATAGAACCCATAATGCTAGGATATCTTGCTCTATTGCGCCAAAGTATGCTCCTTATCCCACCGCTACTGCGGAAGCAGAGACAAGATCCTGGAAGAAACTAATTAACATTGCAGTATCAGGTGCTGCTGGAATGATTTCTAATCATCTTCTTTTCAAGCTTGCATCTGGTGAGGTATTTGGTCCTGACCAACCTATCGCACTGAAATTATTGGGATCTGAAAGATCATTCCAAGCTCGTGAAGGAGTTGCGATGGAGCTGGAGGACTCATTGTTTCCATTATTGAGGGAGATGAGCATTGGGATTGATCCGTATGAGATGAGAATAGAGCTAAATGTCAGGAGTATTAACAACTGGCAAGTTGGAGCATCTCTAGAACTGTGTTTTCTGGGAATAAAATTTAAGAGAGGTGGTGTGCTTATTCAAAAGTGGGGAAGATCATCAGCTGCATCAACTGCTGTGTCAATTGTTGATGCCATACGGTCTTTAATCACTCCTATTCCTGAGGGAGATGGTGATTATGAGCTTGTCAAGGATGTCATATTTGATGACTATCTTCTGCAGCGAATAGCTAAGATGGATAAGAGGCGTGTGGCTCACCTAACGGGCGAGTTTAAGTCTATCAAATCTAGCTGTACGAATTACAATGAACAAATACATAAGAGCACCGCGTAG	1767	0.5263	MALPILLFLLLSLPLASASGHHLTLDYYARTCPTFQAIVRDNVFTKQSAVPSTAAGVLRLFFHDCFTDGCDASLLISSNGYARGERDAVPNQSLSGDAFDIIVKIKNALELTCPGVVSCSDIVAQTTRDLVKMVGGPYYDVLLGRKDSLVSNISKPNETLPEATMSMDQIIFQFTAKGFSIREMVALTGAHTIGFTHCKEFSRRIYNFSATSETDPTMNPKLVAGLKKLCENYTEDWSMAAFNDLRSPSKFDNAYYQNILNGLGLLTTDYMMSADPRTRPIVEVYADNQTAFFEDFAAAMHKLSTHQVKTGKKGEVRLRCDQFNNVPIVQTLNNMTHLRSSFRLSILSKSLSLTKSHHFTFRTLNRTHNARISCSIAPKYAPYPTATAEAETRSWKKLINIAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSFQAREGVAMELEDSLFPLLREMSIGIDPYEMRIELNVRSINNWQVGASLELCFLGIKFKRGGVLIQKWGRSSAASTAVSIVDAIRSLITPIPEGDGDYELVKDVIFDDYLLQRIAKMDKRRVAHLTGEFKSIKSSCTNYNEQIHKSTA	588

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele48g1427	588	Gene3D	-	396	477	-	-
	Lele48g1427	588	PRINTS	Haem peroxidase superfamily signature	54	68	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Lele48g1427	588	PRINTS	Haem peroxidase superfamily signature	135	147	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Lele48g1427	588	PRINTS	Haem peroxidase superfamily signature	183	198	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Lele48g1427	588	PRINTS	Haem peroxidase superfamily signature	244	259	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Lele48g1427	588	PRINTS	Haem peroxidase superfamily signature	117	134	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Lele48g1427	588	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	392	471	IPR036291	-
	Lele48g1427	588	CDD	secretory_peroxidase	22	323	IPR033905	GO:0004601\|GO:0042744
	Lele48g1427	588	Gene3D	Peroxidase, domain 2	161	303	-	-
	Lele48g1427	588	ProSiteProfiles	Plant heme peroxidase family profile.	22	324	IPR002016	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele48g1427	Lele-ChrLele48	18091075	18099504	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele48g1427	5	328	Peroxidase	AT5G47000	56.481	5.48e-128	377

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