Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1418 ATGGGTTTTCCTTATCAGCTGTATTTATGTTTGCATTTATTCATTTTTCTGGGGATTTGTGTGGCTTCTCCTCTTGGAGATCAAAAGAGAGATAGGATTACTGAGTTGCCAGGACAACCAAAGAATGTGGGCTTTGCTCAGTACTCGGGCTACGTGACGGTGAATAAGGAGTCAGGGAGGGCATTGTTCTATTGGTTGACTGAAGTACCAACAAGTCGTGGACCCAAGTCAAGGCCATTGGTGTTATGGCTTAATGGCGGTCCTGGATGCTCCTCTATTGCTTATGGGGCATCTGAAGAGATAGGACCTTTTCGAATTAGGCCTGATGGGGACTCACTTTACTTGAATCCTTACGCTTGGAACAAATTGGCAAATATACTGTTCCTTGATTCTCCCGCTGGTGTTGGCTTTTCATATACGAACAAAACGTCAGATCTGTTTACAATGGGAGATCGGAGAACAGCTGAAGATGCATATACATTTCTTGTTTACTGGTTTGAAAGATTTCCTCAGTATAGACATAGAGAATTCTACATTGCTGGAGAAAGTTATGCTGGTCACTATGTTCCTCAGTTGGCTCAGATTATTTACCAGAAAAACAAGGGTATCAAGAATCCGGTTATTAATTTTAAGGGATTTATGGTTGGAAATGCTGTGACTGATGATTACCATGATTACATTGGGACATTTGAGTACTGGTGGACTCATGGCTTGATTTCAGATTCCACATATAGGATGCTGAGAATTGGCTGTACTTCTGGGTCCTCCCAGCATCCAACAGTGAAATGCATGCAGGCCCTCAGAGAGGCAGTTGTGGAACAGGGCAACATTGATCCATATAGCATTTATACAAGGCCATGCAATAGCACAGCATCACTCAGACATGGCTTGAGGGGTCGCTACCCATGGATGTCTCGAGCATACGATCCCTGCACAGAAAGGTTTGCAGACTTATACTTTAATCGCCCAGAAGTTCAGAAAGCTCTGCATGCCAATACAACTGGGATTAGTTATTCATGGAAGTCGTGCAGTGACATGGTTGGGAATTATTGGGATGATTCTCCGCTATCTATGCTTCCTATATATCATGAGCTCATTCACGCTGGCCTCAGGATATGGGTATACAGTGGAGATACGGATGCTGTGGTTCCAGTAACTGCAACTCGATATTCCATTGATGCCTTGAAGTTGCCTACCATCATCAACTGGTATCCTTGGAATGACAATGGCAAGGTTGGAGGTTGGAGCCAAGTTTATAAAGGGCTCACGTTGGTGACAGTTACAGGAGCGGGACATGAGGTTCCACTTCACAGGCCTCGCCAAGCATTTATTCTTTTCAGGTCATTCTTGGAGAACAAGTACATGCCTGCTTGA 1374 0.441 MGFPYQLYLCLHLFIFLGICVASPLGDQKRDRITELPGQPKNVGFAQYSGYVTVNKESGRALFYWLTEVPTSRGPKSRPLVLWLNGGPGCSSIAYGASEEIGPFRIRPDGDSLYLNPYAWNKLANILFLDSPAGVGFSYTNKTSDLFTMGDRRTAEDAYTFLVYWFERFPQYRHREFYIAGESYAGHYVPQLAQIIYQKNKGIKNPVINFKGFMVGNAVTDDYHDYIGTFEYWWTHGLISDSTYRMLRIGCTSGSSQHPTVKCMQALREAVVEQGNIDPYSIYTRPCNSTASLRHGLRGRYPWMSRAYDPCTERFADLYFNRPEVQKALHANTTGISYSWKSCSDMVGNYWDDSPLSMLPIYHELIHAGLRIWVYSGDTDAVVPVTATRYSIDALKLPTIINWYPWNDNGKVGGWSQVYKGLTLVTVTGAGHEVPLHRPRQAFILFRSFLENKYMPA 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1418 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 422 435 IPR001563 GO:0004185|GO:0006508
Lele48g1418 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Lele48g1418 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Lele48g1418 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Lele48g1418 457 FunFam Carboxypeptidase 358 452 - -
Lele48g1418 457 FunFam Carboxypeptidase 27 289 - -
Lele48g1418 457 Gene3D alpha/beta hydrolase 27 289 IPR029058 -
Lele48g1418 457 Gene3D - 311 347 - -
Lele48g1418 457 SUPERFAMILY alpha/beta-Hydrolases 28 455 IPR029058 -
Lele48g1418 457 Pfam Serine carboxypeptidase 37 452 IPR001563 GO:0004185|GO:0006508
Lele48g1418 457 FunFam Carboxypeptidase 308 455 - -
Lele48g1418 457 Gene3D - 358 451 - -
Lele48g1418 457 ProSitePatterns Serine carboxypeptidases, serine active site. 179 186 IPR018202 GO:0004185
Lele48g1418 457 ProSitePatterns Serine carboxypeptidases, histidine active site. 422 439 IPR033124 GO:0004185
Lele48g1418 457 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 439 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1418 Lele-ChrLele48 18042477 18046074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1418 315 453 Calmodulin-binding Proteins AT2G22960 30.000 1.17e-14 70.5