Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1411 ATGATGGCAAAGAAAGAAGATCAGGTCAAAGGGACTCCAAAAGGGCACTTTGTGGTGTATGTGGGGATTGAAATGGAAAGATTTGTGGTTCCTATAACATACCTGAAGAATCCTATGTTTCAGAGATTGCTAGACAAAGCTGCTGATGAGTTTGGCCTTGATAATCCCAATGGGATTGTTCTGCCTTGTGATGCTTCTTCTTTCAGAACACTTATTGCTCTTTTTGACAAGTACAACTGTCCTTAG 246 0.4065 MMAKKEDQVKGTPKGHFVVYVGIEMERFVVPITYLKNPMFQRLLDKAADEFGLDNPNGIVLPCDASSFRTLIALFDKYNCP 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1411 81 Pfam Auxin responsive protein 9 74 IPR003676 GO:0009733
Lele48g1411 81 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 71 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1411 Lele-ChrLele48 18006599 18006931 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1411 13 76 Calmodulin-binding Proteins AT5G20810 40.625 2.86e-16 67.8