Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1401 ATGAGCTTCACTCATCAGATTCATCAAAACAATGGACACCATGAAGATCATCACGATCAAGATCCTTGCCTCCAAGCCATGATCCTAACATGTGGACACACATACCCAGCTGTTATAAACGCAGCCTGTGATCTTAACCTCTTCGATATCATCTCAAAAAAAAGCGGTGCCCTTGTTTCTGCGTCTGAGATTGCTTCTCAGCTTCCTCTTTTGACCTCGAATAAGGTCTCCACATCCAAACTCGATCGCATGCTTCGTTTTCTGGTGAGTTTCTCAGTCCTCACTTGCTCTCCTCGCTCCAATGAAGACGGAAGCATAGAGAAGCTCTATGGACTCTCCCCTACCGGAAAATACTTCGTCAAGAAACCAGACGGCGATCCCACTTGGGCTTCCTTGTTCCCCAAGCTGTCCTACCACCCATACATGGCCCGAGTCTGGTTACACTGCAAGGAGGCCGTTCTGGATGGAGGAGTGGACATATTTAAGAAAGTGAATGGGCAGAGAATGTACGAGTACGTGGAGAAGGATTTAGAGCTCAAGAACTTGTTTCAGGCGACAATGGCTGAAATATCTGCACTGCACATGGAGAAGATTCTGGAAGTGTACAAAGGCTTCGAAGGCATATCTCAGCTTGTCGATGTGGCCGGTGGAATTGGTCAAAGCCTCATGATGATCATCTCCAAGTATCCTTCTTTACAGGGTGTCAACTTTGACTTGCCACGTGTCGTCCAAGATGCCCCTCACTTCCCAGGACTAACACATGTCGGAGGGGACATGTTCAAGAGTATACCAGAAGGAGAAGCTATAATGATCAAGGGAACAACTCATAACTGGTCAGATGAGAAGTGCGTAAAACTTTTTAGTAATTGCCGAGAAGCATTGAAGGAAGGTGGAAAAGTGATAATAATAGATCTGATGATGCCACAAGATCCAGAAACCATCAAGTCTGCAAAATATCTGAGCATCTTTGACAGTGTGATGATGCTGCAAGGAGGTGGAAGGGAAAGAACTGAGAAGGAATTTGAGATTCTATGCAAAAGAGCTGGCTTTTCTGGCTTCAAGCTTGTTTGTCACGCTTTGTCCAAAATCTTAGGAGTCATGGAATTTTATAAATAA 1116 0.4507 MSFTHQIHQNNGHHEDHHDQDPCLQAMILTCGHTYPAVINAACDLNLFDIISKKSGALVSASEIASQLPLLTSNKVSTSKLDRMLRFLVSFSVLTCSPRSNEDGSIEKLYGLSPTGKYFVKKPDGDPTWASLFPKLSYHPYMARVWLHCKEAVLDGGVDIFKKVNGQRMYEYVEKDLELKNLFQATMAEISALHMEKILEVYKGFEGISQLVDVAGGIGQSLMMIISKYPSLQGVNFDLPRVVQDAPHFPGLTHVGGDMFKSIPEGEAIMIKGTTHNWSDEKCVKLFSNCREALKEGGKVIIIDLMMPQDPETIKSAKYLSIFDSVMMLQGGGRERTEKEFEILCKRAGFSGFKLVCHALSKILGVMEFYK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1401 371 FunFam Caffeic acid 3-O-methyltransferase 5 119 - -
Lele48g1401 371 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 27 371 IPR016461 GO:0008168
Lele48g1401 371 SUPERFAMILY "Winged helix" DNA-binding domain 19 122 IPR036390 -
Lele48g1401 371 Gene3D Vaccinia Virus protein VP39 126 371 IPR029063 -
Lele48g1401 371 Pfam O-methyltransferase domain 146 351 IPR001077 GO:0008171
Lele48g1401 371 Gene3D - 4 119 IPR036388 -
Lele48g1401 371 PANTHER O-METHYLTRANSFERASE 26 358 IPR016461 GO:0008168
Lele48g1401 371 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 358 IPR029063 -
Lele48g1401 371 Pfam Dimerisation domain 38 89 IPR012967 GO:0046983
Lele48g1401 371 PIRSF O-mtase 4 371 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1401 Lele-ChrLele48 17934834 17936536 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1401 19 360 Monolignol Biosynthesis Gene Families AT5G54160 45.773 3.92e-102 304