Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1399 ATGGGTTCTACAGAGAAGTACAGCCACAAGGAGCTTGCCACTAAGGAAGAAGACGATGAAGCCTGCCTCTGTGCCATGCTCTTATCGAGCTTTCAGGTTTTCCCCGCCATTCTGAACGCCGCCATAGAGCTGAAGGTGTTGGACAAGATCTCTGAGAAATCTGGTGATGATTTCTTGTCAGTTTCAGAGATTGCTTCTGAACTTCCCACGCAACACTCTGAATTACACGACAGGCTCGACCGAATGCTGCGAGTTCTTGCGTCCTTCAAGGTTCTGGACTGGACCGCTCGCACCAACCATGATGGTCAGGTCGACAGGCTCTATAAACTCTCTCTTGCCGGCTCTTATTTTCTTCAGTCTCAAACTGAGAGCCTCGTTTCTTTCTCTAATCTTCAGTGCCATCCGGCTACTACTAAGGTTTGGCTGAACATAAAGGAAGCAATTCTGGACGGAGGAGTAGACCTGTTCAATAAAGTACACGGCATAACAATGTGGAAGTACATGGAGAAGGAGGACACAAAGCTCAACCAGACATTCAACAAGGCAATGGCGGGCATGTCAGCAATTCAGATGAGGAAGTACTTGGAAGTGTATGATGGCTTTCAAGGAGTTTCAACCTTAGTTGATGTCGGAGGAGGCACCGGTCAAAGCCTCCAAACCATAATCTCCAAGCACCCTCACATCAAGGGCATTAACTTTGATTTGCCCCAAGTCATTCAGCATGCCCCACCCCATCCACGAATCAAGCATGTTGGAGGAGACATGTATGCAAGTGTTCCCAAGGGTGATGCTATTATGGTCAAGGCTACGTGTCACAATTGGTCGGATGAAAAATGTGTGGCGCTCTTGAAGAACTGTCACAAAGCGCTTCCTGAAAATGGGAAGGTGATCATTCTGGACATGATATTGCCTGAGGAACCAGATTCTAGTGATGCTACTAAGTATGCCTCTATTGTAGACAACTCCATGTTTATTCAAGCTGGTGGCAGAGAAAGAACTGAGAAACAGTTCGAGAACCTCTGCAAAAACTCTGGATTCTCCAGCTTCCGTGTTGCCGCTCGTGCTCTCTCCGTTTACGGCGTCGTCGAGTTTTACAAATGA 1101 0.4741 MGSTEKYSHKELATKEEDDEACLCAMLLSSFQVFPAILNAAIELKVLDKISEKSGDDFLSVSEIASELPTQHSELHDRLDRMLRVLASFKVLDWTARTNHDGQVDRLYKLSLAGSYFLQSQTESLVSFSNLQCHPATTKVWLNIKEAILDGGVDLFNKVHGITMWKYMEKEDTKLNQTFNKAMAGMSAIQMRKYLEVYDGFQGVSTLVDVGGGTGQSLQTIISKHPHIKGINFDLPQVIQHAPPHPRIKHVGGDMYASVPKGDAIMVKATCHNWSDEKCVALLKNCHKALPENGKVIILDMILPEEPDSSDATKYASIVDNSMFIQAGGRERTEKQFENLCKNSGFSSFRVAARALSVYGVVEFYK 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1399 366 FunFam Caffeic acid O-methyltransferase 119 366 - -
Lele48g1399 366 Pfam Dimerisation domain 37 87 IPR012967 GO:0046983
Lele48g1399 366 Pfam O-methyltransferase domain 141 347 IPR001077 GO:0008171
Lele48g1399 366 CDD AdoMet_MTases 206 298 - -
Lele48g1399 366 Gene3D Vaccinia Virus protein VP39 118 366 IPR029063 -
Lele48g1399 366 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 124 358 IPR029063 -
Lele48g1399 366 PANTHER O-METHYLTRANSFERASE 26 364 IPR016461 GO:0008168
Lele48g1399 366 SUPERFAMILY "Winged helix" DNA-binding domain 16 120 IPR036390 -
Lele48g1399 366 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 366 IPR016461 GO:0008168
Lele48g1399 366 FunFam Caffeic acid 3-O-methyltransferase 3 117 - -
Lele48g1399 366 Gene3D - 1 117 IPR036388 -
Lele48g1399 366 PIRSF O-mtase 3 366 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1399 Lele-ChrLele48 17923714 17925876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1399 18 366 Monolignol Biosynthesis Gene Families AT5G54160 48.588 2.49e-105 312