LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele48g1393	ATGGATTCCTCCAAGCACCCCCCTCCTCCTCCTCCCTCCAACACTACCACTAAGCCTTCCTCTCTTCAGCTCGAGCCCGCTACCTCCCTTGAGCCCAGTCCCTTACGTAAGATCGTCGCCGTCGCCTCCATCGCCTCCGGCATTCAGTTCGGCTGGGCTCTCCAGCTTTCCCTCTTGACCCCTTACGTCCAACTACTCGGCATCTCTCACACCTGGGCCCCCTTCATTTGGCTCTGCGGCCCCATTTCCGGCATGATCGTCCAACCCATAGTTGGATACCACAGTGACCGCTGCACTTCCCGATTCGGACGCCGACGTCCCTTCATTGCCGCTGGCTCTGCCTTCGTCGCCGTCGCCGTCTTCCTCATCGGCTACGCAGCCGATATGGGCCACATGTTCGGTGACTCCTTGGAGAAGAAAACCCGGCCGCGCGCCATCGTCATATTCGTCGTCGGGTTCTGGATCCTCGACGTCGCCAACAACATGCTCCAGGGGCCGTGCCGAGCGCTTCTGGCAGACCTCGCCGCCGGGGACCAGCGTAAGACGCGAACTGCGAACTCGTTCTTCTCGTTCTTCATGGCCGTGGGAAACGTCCTCGGGTACGCCGCGGGGTCGTTCAGCCGACTCCACAAGATGTTCCCGTTCACGATGACCACAGCCTGCAACGTGTACTGCGCGAACCTCAAGAGCTGCTTCTTCCTCTCCATCGCACTTCTGACGACTGTATCCGCCATTGCCCTGACGTACGTGAAGGAGAAAAAGGCGTCGTCGGGTGAGAAAACAACGAAAGAAGCCGGTGGTGCGGAGGGAAACGAAGAGGAATCAGAAGAAGGATCAAGATCGTCACGAGCAATGCCTTGCTTCGGGGAAATATGGGGTGCTGTGCGAGTGATGGAGAAGCCGATGTGGATCTTGCTCTTGGTGACCTGTCTCAACTGGATTGCTTGGTTCCCCTTCTTGCTGTTTGACACTGATTGGATGGGGAAGGAGGTGTATGGCGGGAAGGTGGGAGAAGGGGCAGAAGGGAGGCTGTACGATATGGGGGTGCGCGCGGGTGCATTGGGCCTCTTGATCAACTCCGTGGTGCTGGGATTCACGTCCTTGAGCATCGAGTTTCTGGCGCGTGGGGTCGGGGGCGTCAAGAGGCTCTGGGGAATTGTGAACTTCCTGCTCGCCACCTGTTTAGCGCTCACCGTGCTGATTACAAAAATCGCCGACCACTCGCGCAAGTACAACGTCCGCATGGAGCCTCTGCCGCCGTCCTCCGGGGTGCAAGGTGGCGCGTTAGCTCTTTTCGCGGTGCTGGGTGTCCCCCTTGCGGTTACTTTCAGTATTCCTTTTGCTCTTGCATCTATATTCTCCAACAGTTCAGGGGCAGGCCAAGGGCTATCTTTGGGAGTTCTTAATCTTTCAATCGTCATTCCACAGATGGTGATTTCCGTGGCAAGTGGACCATGGGATGCTTTGTTTGGTGGCGGAAACTTGCCAGCATTTGTGGTGGGCGCCGTGGCAGCAGCCATAAGTGCCTTATTATCCATATTCGTACTTCCATCCCCATCGCCCGATATGGCCAGTACTGCAGCAGTGGCGGCCGGAGGCTTCCATTAA	1608	0.5759	MDSSKHPPPPPPSNTTTKPSSLQLEPATSLEPSPLRKIVAVASIASGIQFGWALQLSLLTPYVQLLGISHTWAPFIWLCGPISGMIVQPIVGYHSDRCTSRFGRRRPFIAAGSAFVAVAVFLIGYAADMGHMFGDSLEKKTRPRAIVIFVVGFWILDVANNMLQGPCRALLADLAAGDQRKTRTANSFFSFFMAVGNVLGYAAGSFSRLHKMFPFTMTTACNVYCANLKSCFFLSIALLTTVSAIALTYVKEKKASSGEKTTKEAGGAEGNEEESEEGSRSSRAMPCFGEIWGAVRVMEKPMWILLLVTCLNWIAWFPFLLFDTDWMGKEVYGGKVGEGAEGRLYDMGVRAGALGLLINSVVLGFTSLSIEFLARGVGGVKRLWGIVNFLLATCLALTVLITKIADHSRKYNVRMEPLPPSSGVQGGALALFAVLGVPLAVTFSIPFALASIFSNSSGAGQGLSLGVLNLSIVIPQMVISVASGPWDALFGGGNLPAFVVGAVAAAISALLSIFVLPSPSPDMASTAAVAAGGFH	535

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele48g1393	535	TIGRFAM	GPH_sucrose: sucrose/H+ symporter	34	521	IPR005989	GO:0005886\|GO:0008515\|GO:0015770
	Lele48g1393	535	Pfam	MFS/sugar transport protein	51	263	-	-
	Lele48g1393	535	MobiDBLite	consensus disorder prediction	258	281	-	-
	Lele48g1393	535	SUPERFAMILY	MFS general substrate transporter	38	519	IPR036259	-
	Lele48g1393	535	CDD	MFS_SLC45_SUC	38	495	-	-
	Lele48g1393	535	MobiDBLite	consensus disorder prediction	258	280	-	-
	Lele48g1393	535	Gene3D	MFS general substrate transporter like domains	30	516	IPR036259	-
	Lele48g1393	535	PANTHER	SUGAR TRANSPORTER	34	515	-	-
	Lele48g1393	535	FunFam	Sucrose transport protein	32	516	-	-
	Lele48g1393	535	MobiDBLite	consensus disorder prediction	1	16	-	-
	Lele48g1393	535	MobiDBLite	consensus disorder prediction	1	26	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele48g1393	Lele-ChrLele48	17899321	17902072	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele48g1393	23	535	Sucrose Transporter Gene Family	AT1G71890	65.631	0.0	677