Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1372 ATGGATAACAGTAATAATGGTTCTATATCAAGTGATCAGCATCACAAAGCTCATGAATCAGTTTCAAAAAGTGCAGATTCACTATCTGTTTCTCCATCGCAAACTTCTCCAAAGTCACCGAGACCCAGTGGCTCTCCAAGGTCCCCTAGGTTCCAAGTCATCAAGGGCGGCAAGCAAAGTTCAAATCATGATAAGCACCCACAAGCTCCCAGAGATGCATGGCCCAAGAAAGAAAGTGCAGATTCATCCCCCGTTACTTTGAAAATTTCTCCAACGTCACCAACATCTCCCACTTCTCCAAGGTTACCTAGCCATAGTCCAAAGAACGAAAGGCATTCACGTTCGCCAAGAGATGGACGACCAAAGAAAGAAGGTTGCGGAGGGAAAGGCACGTGGGGAGGATTGCTTGATACTGAAGACATGAACATTATTGACCCTCATGATCCAAACTATGACAGCACTGAGTATGAAAGCAAGTGTGGTTTGCAGGAAAAGGAACCTTCAAATGAAAAGAATAAAATGGTAGGGGAGTTAGATGAGTACAAGAAGAAAGCTACAATAATAGTGGAGGAATATTTTACAACTGATGATATTGTTGCTGTAAAAAATGAAATGAAAGAACTGGGAACACCATACTTTAGCTACTATTTTGTCAAAAAGCTTGTTTCAATGTCAATGGACAGACATGACAAAGAAAAAGAAATGGCTGCTGTTCTGCTATCTGCACTTTATGCTGACACAATTGATCCTTCTCAAGTTTACAAGGGCTTCAGTAAACTAGTTGAATCTGCAGATGACCTGATTGTAGACATACCAGACGCGGTCGATGTTCTAGCGCTTTTCTTGGCTCGAGCCGTTGTTGATGACATACTTCCTCCTGCATTTCTGAAGAAACAGATGGCTTACTTACAGAAGGATTCGAAAGGGGTTGATGTCTTGAAAAAGGCAGAGAAGAATTATCTTGCAGCGCCTCTGCATGCAGAAATTATAGAGCGCCGGTGGGGAGGAAGTAAGAATATGACAGTTGATGATGTGAAGGCAAGAATAAACAATTTGTTGATAGAATATGTAACAAGTGGTGAAAAGAAAGAAGCTTTTAGATGCATTAAGGATTTGAAAGTTCCATTCTATCATCATGAGATAGTGAAAAGGGCTCTTATAATGGCAATGGAGAGGAGCCAAGCAGAAGGTCCCCTACTAGATCTCTTGAAAGAGGCAGCTGAGGAAGGTTTTATCAACTCCAGTCAAACCTCGAAGGGCTTTGATCGGTTGATTGACACTGTCGATGACTTATCACTCGACATACCGAATGCGCGTGAAATTCTCCAAAAACTAATGTCCAAGGCAGCATCTGAGGGTTGGTTATGTGTTTCATCTTTAAAATCACTCTCCATGGGGCCAGAAAAGAAGTCGCTAAAAGAAAGTTTAGCCAGAAGTTTCAAGGTAAAGGCTCAGTCCATAGTTCAAGAGTACTTCTTGTCAGGTGATATATTTGAAGTAATTAGTTGTCTTGAGCAAGAAAACAACACTTGCTCTGCACAACTCAATGCAATCTTTGTCAAGAGACTCATAACTTTAGCTATGGATCGAAAGAAGCGCGAGAAGGAAATGGCCTCGGTTCTTCTGTCGTCTCTGTGTTTCCCGGCTGATGATGTAGTCAATGGTTTTGTGATGTTGATAGAATCAGCAGATGACACTGCTCTGGATAATCCAGTAGTGGTAGAAGATCTTGCCATGTTCCTGGCCAGAGCAGTAGTGGATGAAGTCCTGGCCCCACAACATTTAGAAGAGATTGGAACACAATGCCTGGGACCAGATTCAATAGGAAGCAAAGTTCTTCAAATGGCTAAGTCATTGCTAAAGGCCAGGCTTTCTGGGGAGAGAATATTAAGGTGTTGGGGTGGAGGGGGAAGCAGCAGAAGTGGGTGGGAAATTGAAGATGTTAAGGACAAGATTGTAAACCTTTTGGAGGAGTATGAATCTGGAGGCGACATAAGGGAGGCGTGCCGGTGTATGAAAGAACTTGGAATGCCATTTTTCCACCATGAGGTGGTGAAGAAAGCTCTGGTGAAAATCATTGAGAAGAAGAATGGCAGGTTGTGGGGCCTGCTCAAGGAATGCTTTGAATCTGGACTGATAACTATGAACCAGATGATGAAGGGCTTTGGAAGGCTTGCAGAATCTCTTGATGACTTGGCTTTGGATGTTCCTGATGCTAAGAAACAGTTTATACACTACGTAGAACGAGCAAAGAGCTCACAATGGTTGGATTCTTCATTCAGTCTCAGCAAATTTGAACATTCAACAGAGAATGGAACCTCCTAA 2325 0.4258 MDNSNNGSISSDQHHKAHESVSKSADSLSVSPSQTSPKSPRPSGSPRSPRFQVIKGGKQSSNHDKHPQAPRDAWPKKESADSSPVTLKISPTSPTSPTSPRLPSHSPKNERHSRSPRDGRPKKEGCGGKGTWGGLLDTEDMNIIDPHDPNYDSTEYESKCGLQEKEPSNEKNKMVGELDEYKKKATIIVEEYFTTDDIVAVKNEMKELGTPYFSYYFVKKLVSMSMDRHDKEKEMAAVLLSALYADTIDPSQVYKGFSKLVESADDLIVDIPDAVDVLALFLARAVVDDILPPAFLKKQMAYLQKDSKGVDVLKKAEKNYLAAPLHAEIIERRWGGSKNMTVDDVKARINNLLIEYVTSGEKKEAFRCIKDLKVPFYHHEIVKRALIMAMERSQAEGPLLDLLKEAAEEGFINSSQTSKGFDRLIDTVDDLSLDIPNAREILQKLMSKAASEGWLCVSSLKSLSMGPEKKSLKESLARSFKVKAQSIVQEYFLSGDIFEVISCLEQENNTCSAQLNAIFVKRLITLAMDRKKREKEMASVLLSSLCFPADDVVNGFVMLIESADDTALDNPVVVEDLAMFLARAVVDEVLAPQHLEEIGTQCLGPDSIGSKVLQMAKSLLKARLSGERILRCWGGGGSSRSGWEIEDVKDKIVNLLEEYESGGDIREACRCMKELGMPFFHHEVVKKALVKIIEKKNGRLWGLLKECFESGLITMNQMMKGFGRLAESLDDLALDVPDAKKQFIHYVERAKSSQWLDSSFSLSKFEHSTENGTS 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1372 774 MobiDBLite consensus disorder prediction 141 155 - -
Lele48g1372 774 ProSiteProfiles MI domain profile. 647 766 IPR003891 -
Lele48g1372 774 ProSiteProfiles MI domain profile. 180 301 IPR003891 -
Lele48g1372 774 MobiDBLite consensus disorder prediction 23 41 - -
Lele48g1372 774 SUPERFAMILY ARM repeat 643 761 IPR016024 -
Lele48g1372 774 PANTHER PROGRAMMED CELL DEATH 4 69 760 IPR039778 GO:0045892
Lele48g1372 774 MobiDBLite consensus disorder prediction 1 155 - -
Lele48g1372 774 SUPERFAMILY ARM repeat 478 638 IPR016024 -
Lele48g1372 774 FunFam programmed cell death protein 4 469 624 - -
Lele48g1372 774 ProSiteProfiles MI domain profile. 344 465 IPR003891 -
Lele48g1372 774 SUPERFAMILY ARM repeat 340 461 IPR016024 -
Lele48g1372 774 MobiDBLite consensus disorder prediction 105 125 - -
Lele48g1372 774 FunFam programmed cell death protein 4 170 323 - -
Lele48g1372 774 SMART ma3_7 648 757 IPR003891 -
Lele48g1372 774 SMART ma3_7 181 292 IPR003891 -
Lele48g1372 774 SMART ma3_7 345 456 IPR003891 -
Lele48g1372 774 SMART ma3_7 480 591 IPR003891 -
Lele48g1372 774 Gene3D - 631 763 - -
Lele48g1372 774 Gene3D - 331 463 - -
Lele48g1372 774 Pfam MA3 domain 346 455 IPR003891 -
Lele48g1372 774 Pfam MA3 domain 649 757 IPR003891 -
Lele48g1372 774 Pfam MA3 domain 481 590 IPR003891 -
Lele48g1372 774 Pfam MA3 domain 182 292 IPR003891 -
Lele48g1372 774 Gene3D - 466 623 - -
Lele48g1372 774 Gene3D - 168 320 - -
Lele48g1372 774 ProSiteProfiles MI domain profile. 479 600 IPR003891 -
Lele48g1372 774 MobiDBLite consensus disorder prediction 59 78 - -
Lele48g1372 774 SUPERFAMILY ARM repeat 179 339 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1372 Lele-ChrLele48 17744331 17747001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1372 647 743 Eukaryotic Initiation Factors Gene Family AT4G30680 30.000 6.37e-06 46.6