Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1349 ATGATTTCTTTGAAGAGCACTGACTACTTCGATCCTTTATTCCTACTTACAACCTGCGCTTTCGTTTTTGGTCTATTCCGATTATTGCACGTTATTTTATATTTTAGTCAAGTGACATGGAAGCTATTGATTTTGAAGGATCCTCATGTTGAAGAGTTGCCTCAATACATACATATATCGCACAATGATTTTTTTAATAGAAGGCATGTGAAGCAGAAGGAGGAGGATATTGCTATATGTGAATGCAAATATGATGCTAGTGACCCTGATAGTGCATGTGCAGAGGGGTGTCTTAACGTCTTGACCAGTTCTGAATGCACCCCTGGCTATTGCCCGTGTGGCATCTTTTGCAAAAATCAGAGATTTCAGAAGTGTGAATATGCAAAAACAAAGTTGTTCAAAACTGAAGGCCGGGGATGGGGTCTTTTGGCTGATGAGAACATTAAGGCAGGCCAATTTATCATCGAATACTGTGGAGAAGTAATTTCATGGAAAGAAGCCAAGCGAAGAGCCCAGGCTTATGAAATTCAAGGTCTTAAGGATGCATTCATTATTTGTCTTAATGCCTCTGAATCCATTGATGCAACTAGAAAGGGAAGCCTTGGTAGATTTATAAATCATTCATGTCAGCCAAATTGTGAGACAAGGAAATGGAATGTCTTGGGCGAGATAAGAGTTGGAATATTTGCAAAACAAGATATACCTGTTGGAGCTGAACTGGCCTATGATTACAATTTTGAATGGTTTGGGGGCGCAAAGGTTCGTTGCCTTTGTGGTGCAACCAAATGTTCTGGATTCCTTGGAGCTAAATCTCGTGGTTTTCAGGAAGATACATATTTATGGGAAGATGATGATGAAAGGTACACTGTTGAGAAAATTCCAGTATATGACTCTGCAGAGGATGAGCCTCCCTCAAAGGTCCTTAGAAGCTTACATTCTGGCATTCCTGGTATGCAAGTTAATGGAAAAACCGAACACTCCATGGACGTTGTCATAAAACCTGAACAACTATCAGAGTCAACTGCTTTTAGCATTCAGCCGCTTGCATCAGTTCCAACAAAGGTTTTACATGTCAATTCGATAAAGTCTGAAATAGAAAATCATGACGATTTGAAATTGTACTCTAGAGATACTCAGCAGGGCTTTCCACAAAACAATGCAATGATATCGCGAATCAGAAGTAATACTGCAGCCCGAAACTATCGCATTGGACCTAGGTCCATAGCTGCCAAAAAATCTAAGAAATTTGACGGAAGGTTTAAAAATATCACACACAAGCAAATCGATGTGAAGTCTGCTGCTGAATCTTTAGCATCAAAAGAAGCACAAGAGGAGATTTTAAGATATGAGGAAATGAAGAATGGGGCGACTTGTGGTCTTGATGAGTTATACAATGAAATACGACCAGCGATTGAAGAACATGAGAGGGATAGCCAAGACAGTGTATCCATTAGTGTAGCCGAGAAGTGGATTGAAGCTTGCTGTTCAAAATTGAAGGCGGAGTTTGATCTTTACTCCTCCATTGTGCAGAATTTTGCCTGCACTCCTCTCAAGCCTCGTGGCCTTCCGAATCCTTCTTCTCAAGTTGATAATGAAGACGAAAATAAGTTGTTGACGAATTGA 1623 0.4023 MISLKSTDYFDPLFLLTTCAFVFGLFRLLHVILYFSQVTWKLLILKDPHVEELPQYIHISHNDFFNRRHVKQKEEDIAICECKYDASDPDSACAEGCLNVLTSSECTPGYCPCGIFCKNQRFQKCEYAKTKLFKTEGRGWGLLADENIKAGQFIIEYCGEVISWKEAKRRAQAYEIQGLKDAFIICLNASESIDATRKGSLGRFINHSCQPNCETRKWNVLGEIRVGIFAKQDIPVGAELAYDYNFEWFGGAKVRCLCGATKCSGFLGAKSRGFQEDTYLWEDDDERYTVEKIPVYDSAEDEPPSKVLRSLHSGIPGMQVNGKTEHSMDVVIKPEQLSESTAFSIQPLASVPTKVLHVNSIKSEIENHDDLKLYSRDTQQGFPQNNAMISRIRSNTAARNYRIGPRSIAAKKSKKFDGRFKNITHKQIDVKSAAESLASKEAQEEILRYEEMKNGATCGLDELYNEIRPAIEEHERDSQDSVSISVAEKWIEACCSKLKAEFDLYSSIVQNFACTPLKPRGLPNPSSQVDNEDENKLLTN 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1349 540 PANTHER SET DOMAIN PROTEINS 50 483 - -
Lele48g1349 540 SUPERFAMILY SET domain 53 265 IPR046341 -
Lele48g1349 540 Gene3D SET domain 43 282 IPR046341 -
Lele48g1349 540 SMART PostSET_3 252 268 IPR003616 -
Lele48g1349 540 ProSiteProfiles SET domain profile. 128 245 IPR001214 GO:0005515
Lele48g1349 540 SMART shorttest3 75 127 IPR006560 GO:0005634|GO:0018024
Lele48g1349 540 FunFam Histone-lysine N-methyltransferase 43 280 - -
Lele48g1349 540 MobiDBLite consensus disorder prediction 520 540 - -
Lele48g1349 540 ProSiteProfiles AWS domain profile. 75 126 IPR006560 GO:0005634|GO:0018024
Lele48g1349 540 MobiDBLite consensus disorder prediction 521 540 - -
Lele48g1349 540 Pfam AWS domain 88 125 IPR006560 GO:0005634|GO:0018024
Lele48g1349 540 ProSiteProfiles Post-SET domain profile. 252 268 IPR003616 -
Lele48g1349 540 SMART set_7 128 251 IPR001214 GO:0005515
Lele48g1349 540 Pfam SET domain 139 245 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1349 Lele-ChrLele48 17614201 17617645 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1349 110 267 C2H2 Transcription Factor Family AT2G23740 34.807 2.04e-21 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele48g1349 SET 6.3e-19 No_clan