Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1345 ATGATCTCTCTTTCATTCCAAAGCGACCCCGACAATGTTCAGATCAGGAGATTGCGATCACCTCAAAACTTGACTCCACGCGAGCTCGTGAGGTTCCCGGCAGAACCCGGCGGCGACGAGGGAAACACTGACTACTGGCAGTCACAGTCGGCAGGATTTAACGAAGCTGAAGAGGTGACGACAATGGCGGCTGAACCAGTGGAACCTGTGATGTCAGGGTATTGCAGAGCCGGAGAGTTGTCGGCGATGGTTTCGGCTCTGACGCATGTGGTGTCGTCAGGTTCTTCTGGACACAGAGACACTAACGAATGGATCCAAGGAATTAGCGGTTTTCCTATGATGTCATCTTTTGGCCATGTTCCGTCTCCTCGTTTGTCTCCTTCTTCATCTTCTTCAGGCCCTGTTGTGGGCTCTGCCTCTGGTTCATGGGTAGGCCAGAAAAGAGGCCGTCAAGAAGAAGAAGAAGCTCTATACAAAGCCGCTGTTGGCGACTTCACTGCACCATTACAGAACGAGTCAGCTTCATCAGCAGCGACGGAGGTGGAAGCTTCGAGTATGGCTACCACTGATGCAACGGCGGCTGCTGCTGCCGTGACGGTACCGGTGATGCCATCAGGTGAAACTGGTTCGTACGAAGAAACAGGGGAGAGGAGGAGGAGGTACCGAGGAGTGAGGCAGAGGCCGTGGGGTAAGTGGGCGGCGGAGATTCGCGACCCCCACAAGGCGGCAAGGGTCTGGCTTGGCACGTTCGACACGGCGGAGGCGGCCGCCAGAGCTTATGACGAAGCCGCATTGAGGTTCAGAGGCAGCAGAGCCAAACTAAACTTTCCGGAAAACGTCAGAGCAGTTCCGGTGCCCTTTCAAAATTTTCCGGCCGCCAGCCACGTCCTTCAGCAGTCCCCGGCGGCGCTTCCGTTCATGCAGGCGTCATCCTATCAGGGGCCCACTGATTTGTTCAGAGACTATTGGAATTACACCCAGCTGCCACAGAGCTCCGGCGATTCCCAAGGTCAACGGCATGTACAGCCACCGCAACAGATACCTCCGATTTTACCGCAGCAGTGGCTCTATAATTCTCAATCGAGTGCTCTTCAATCGTCTTCTTCGTTGGTTTCAGCGGCATCATTGTCGACTTCTTCATCTCCCACCGCATTTTTGCCTTCTAGTCAGTTATCCTCTGCTTCATTTGCCCTGCCTTCTGGTCAGCGAATAGGCTATTTCCGACCACCGGGAAACCAGACTCACGGCGGAGAAAGCTCATATTATCCGACGTCAACATGGTCAGATACCGGTAACTTTCCTCCACCGTCTAGGTGA 1317 0.5437 MISLSFQSDPDNVQIRRLRSPQNLTPRELVRFPAEPGGDEGNTDYWQSQSAGFNEAEEVTTMAAEPVEPVMSGYCRAGELSAMVSALTHVVSSGSSGHRDTNEWIQGISGFPMMSSFGHVPSPRLSPSSSSSGPVVGSASGSWVGQKRGRQEEEEALYKAAVGDFTAPLQNESASSAATEVEASSMATTDATAAAAAVTVPVMPSGETGSYEETGERRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAARAYDEAALRFRGSRAKLNFPENVRAVPVPFQNFPAASHVLQQSPAALPFMQASSYQGPTDLFRDYWNYTQLPQSSGDSQGQRHVQPPQQIPPILPQQWLYNSQSSALQSSSSLVSAASLSTSSSPTAFLPSSQLSSASFALPSGQRIGYFRPPGNQTHGGESSYYPTSTWSDTGNFPPPSR 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1345 438 ProSiteProfiles AP2/ERF domain profile. 220 277 IPR001471 GO:0003700|GO:0006355
Lele48g1345 438 MobiDBLite consensus disorder prediction 402 438 - -
Lele48g1345 438 MobiDBLite consensus disorder prediction 122 139 - -
Lele48g1345 438 PRINTS Ethylene responsive element binding protein signature 243 259 IPR001471 GO:0003700|GO:0006355
Lele48g1345 438 PRINTS Ethylene responsive element binding protein signature 221 232 IPR001471 GO:0003700|GO:0006355
Lele48g1345 438 CDD AP2 228 279 IPR001471 GO:0003700|GO:0006355
Lele48g1345 438 PANTHER DNA-BINDING DOMAIN 179 362 IPR044808 GO:0003700|GO:0009873
Lele48g1345 438 MobiDBLite consensus disorder prediction 413 438 - -
Lele48g1345 438 Pfam AP2 domain 220 269 IPR001471 GO:0003700|GO:0006355
Lele48g1345 438 FunFam Ethylene-responsive transcription factor 2 219 278 - -
Lele48g1345 438 SMART rav1_2 220 283 IPR001471 GO:0003700|GO:0006355
Lele48g1345 438 SUPERFAMILY DNA-binding domain 220 278 IPR016177 GO:0003677
Lele48g1345 438 MobiDBLite consensus disorder prediction 122 148 - -
Lele48g1345 438 Gene3D AP2/ERF domain 219 279 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1345 Lele-ChrLele48 17600759 17603227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1345 212 295 AP2-EREBP Transcription Factor Family AT2G33710 70.238 1.30e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele48g1345 AP2 9.1e-15 CL0081