Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1329 ATGAATGTTCACATTACACATGGGTCGTCTGGGGAACATGCTTGCATATCAAGGAAGATTATGAAGTCGAAGCACGATCGTCAGAATGGGTGCTGCTCTTCAAAATCAAACGCAGTTCCTTCTTCTGCCACTGAACCTCTAGTCAATCATCACTCTCTCTCTCTCTCCCGCGAGCAGACACTCCCCATTTATACCCCACCACCCCCAGAAGAATCTCTCCCCCTCTCTCTCACCCTACCCACCAACTTTTGGAAGAAAGAGAGCAGCAGAATTTCTTCCATGGACCCCAAGTTCGTCGGAAAGCTGCCGATGACGGTGGACCTCGAGCAGATGCCTGACGCCCCACAGCGTGGGTTCCACCACCGTAGGTCCCACTCCGACACCTCCTTCCGCATCGCCAACTTCGATGAGCTCCTCCTCTTCGACCCTTCCGACCTCGATATCTCCAACCTTCCTTCGCCGGCGTTGCCCAACTCCACCGGCACCAACGCCTCGCCTTTCTCCGCCGCCGCTACAGCAAACAGCAGCGGCGTGCCTGCAGCCATGGATTTTGTCTCAAAGCCGTCGGAAGAACCCGACGGCAGGAATTCACGGTCCAGACCCGCGGGTTCCCCTGTCGGCCATATCCGGAGCTTGTCTATGGACTCTGATTTTTTCAACGGCCTGGGATTGACTGGTGGCCTTGATGGGGACAAACTTGGCGGGCAAGGTGTTGAGGAGAGAAGGCCGAGTCATCATAGGCACAGCAATTCCATGGATGGGTCATCGTCGTTGTCTTTTGAGGCCGACTCTTCCATGGCTATCGACGGTGTGAAGAAGGCCATGGCTCCCGATAAGCTCTCTGAACTTGCTCTCGTTGATCCCAAGAGAGCTAGGAGGATTCTTGCTAATAGGCAATCTGCTGCGCGATCAAAGGAGAGAAAAATTCGGTACACAAATGAGCTGGAAAGGAAGGTGCAGACGCTTCAAAATGAAGCAACTAACCTCTCTGCTCAGGTTACTATGCTTCAGAGAGACACTACAGGGTTGACCCATGAGAATAAGGAGCTTAAACTGCGCTTAGAGGCTATGGAACAACAAGCACAGCTTAGAGATGCGCTGAATGAAACATTGAAGGAAGAACTGCAGCGCCTGAAGCTACAAAGCAGTCAAATGGCTGCTATGAATGTCAACCCTTCTTATGGTGGGTTTCTCTCTCAATTTGCTTCTCAGTTGGCGTTGCAACATCTTCCTAATCCTCCATCCCAGCAGGCACAACAACAGCAATCACAGCCCGGCATGCCTCCGTCATCCGCTGATCAACCTTTCAGCTGA 1314 0.5251 MNVHITHGSSGEHACISRKIMKSKHDRQNGCCSSKSNAVPSSATEPLVNHHSLSLSREQTLPIYTPPPPEESLPLSLTLPTNFWKKESSRISSMDPKFVGKLPMTVDLEQMPDAPQRGFHHRRSHSDTSFRIANFDELLLFDPSDLDISNLPSPALPNSTGTNASPFSAAATANSSGVPAAMDFVSKPSEEPDGRNSRSRPAGSPVGHIRSLSMDSDFFNGLGLTGGLDGDKLGGQGVEERRPSHHRHSNSMDGSSSLSFEADSSMAIDGVKKAMAPDKLSELALVDPKRARRILANRQSAARSKERKIRYTNELERKVQTLQNEATNLSAQVTMLQRDTTGLTHENKELKLRLEAMEQQAQLRDALNETLKEELQRLKLQSSQMAAMNVNPSYGGFLSQFASQLALQHLPNPPSQQAQQQQSQPGMPPSSADQPFS 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1329 437 MobiDBLite consensus disorder prediction 230 259 - -
Lele48g1329 437 CDD bZIP_plant_RF2 290 339 IPR044759 GO:0003700|GO:0006355
Lele48g1329 437 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 287 350 IPR004827 GO:0003700|GO:0006355
Lele48g1329 437 FunFam Transcription factor VIP1 288 341 - -
Lele48g1329 437 MobiDBLite consensus disorder prediction 234 249 - -
Lele48g1329 437 MobiDBLite consensus disorder prediction 30 52 - -
Lele48g1329 437 SUPERFAMILY Leucine zipper domain 289 341 IPR046347 GO:0003700|GO:0006355
Lele48g1329 437 MobiDBLite consensus disorder prediction 26 52 - -
Lele48g1329 437 MobiDBLite consensus disorder prediction 405 437 - -
Lele48g1329 437 Coils Coil 305 388 - -
Lele48g1329 437 Gene3D - 288 341 - -
Lele48g1329 437 MobiDBLite consensus disorder prediction 180 210 - -
Lele48g1329 437 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 62 424 - -
Lele48g1329 437 SMART brlzneu 285 349 IPR004827 GO:0003700|GO:0006355
Lele48g1329 437 Pfam bZIP transcription factor 289 346 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1329 Lele-ChrLele48 17489163 17494114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1329 107 428 bZIP Transcription Factor Family AT1G43700 48.649 2.99e-76 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele48g1329 bZIP_1 3.4e-07 CL0018