Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1327 ATGGATTCCAACCAAATACCAAAAATTTCCCTTCAAAGCACCGACCTTGAGACACAAATCACACCTCTAGAGACAGACCAGATCACTAATGAAAACAAAGATTTTGATTACTGCAAAAGATCTCAATGGCTAAGGGCAACAGTTTTGGGAGCCAATGATGGGTTGGTGTCCACAGCATCTCTAATGGTGGGTGTGGGAGCAGTGAAGCAAGACATCAAAGCCATGATCCTCTCAGGCTTTGCTGGTCTTGTGGCCGGAGCTTGCAGTATGGCCTCTGAGAATCAGAAAGAAGAAGAGAAAGAGGGATTGCCAAAGCCATTTCAAGCAGCGGTAGTATCAGCTTTGGCATTTCCAGTGGGAGCAATTGTGCCATTGCTGGGAGCTTCGTTTATAAAAGAGTACAGGTTAAGGTTAGGGGTGGTTGTGGGTGCAGTGAGCTTGGCCTTGGTGGTCTTTGGATGGCTAACTGCAGTTCTTGGTGGGTCTCCGGCTTTGAGATCTGTGGTTAGGGTCTTGGTTGGGGGTTGGCTAGCCATGGCCATAACTTTTGGGTTAACCAAGTTGATTGGCTCAACTAGACTCTAG 585 0.4735 MDSNQIPKISLQSTDLETQITPLETDQITNENKDFDYCKRSQWLRATVLGANDGLVSTASLMVGVGAVKQDIKAMILSGFAGLVAGACSMASENQKEEEKEGLPKPFQAAVVSALAFPVGAIVPLLGASFIKEYRLRLGVVVGAVSLALVVFGWLTAVLGGSPALRSVVRVLVGGWLAMAITFGLTKLIGSTRL 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1327 194 Pfam VIT family 44 91 IPR008217 GO:0005384|GO:0030026
Lele48g1327 194 Pfam VIT family 98 186 IPR008217 GO:0005384|GO:0030026
Lele48g1327 194 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 96 189 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1327 Lele-ChrLele48 17481384 17482044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1327 16 194 Nodulin-like Gene Family AT3G43660 59.596 1.38e-79 234