Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1324 ATGGAAGGAAATTTATCTCAAGGAGGTATGGTTCCAGTTGGTGCTTCTTTTAGTGGTTTTGATTTGTCAGGATCAATGCGTGTTCATCAGCAAGCTGAGCACCCCCACAATATGCACCAACCTCAAACACATCTGCGCCAAGGGTCTTCTGTGCATTCGGCTTGCCATGATGGTTTTCCTCTTGCCATGGGAACCTTGCAAAACTGCGATCAAACCATCTTAATGGCTGACTTTACTAAGGGAGATAGGAGCAAGAACTCAGCAAGTGAGGATGATGAACCAAGCTTGACTGAAGATGGAGCTGATGGTCGCAATGAAGCAGTCAGAGGGAAAAAGGGTTCACCTTGGCAGCGTGTGAAGTGGACTGATGAGATGGTGAAGCTTCTGATAACAGCTCTTTCTTATATAGGTGAGGATTCAAATTCTGACAGTGGTAATGGAGGAAGAAGAAAGTTTGCAGTCCTACAGAAAAAGGGTAAGTGGAAATCTATTTCTAAGGTCATGGCTGAAAGGGGCTACCGTGTTTCACCTCAGCAATGTGAGGATAAATTCAATGATCTTAATAAAAGGTATAAAAGACTTAATGACATGATTGGGAGGGGCACCTGTTGTAAAGTTGTTGAGAACCCTGCTCTGTTGGATGTCCTAGATTATCTTTCTGAGAAGGATAAGGAAGATATTCGGAAAATATTAGGCTCAAAACACCTGTTCTATGAAGAGATGTGTTCGTACCATAATGGTAATAGATTGCATTTACCTCATGATCCAGTTTTGCAGCGTTCACTACAGGCAGCTCTTAGAAATAGGGATGACCATGATAATGATGATGTCAAAAGGTCCCATCATGATGATCATGAAGAAGATGATCAAGATGTGGACACCGATGATCATGATGAATTTGAAGAGACTTATGCTTCACACCGAGATAATAGAGGAGTATATGGTGCATTGGGGGGATCTGCGAAGAAATTGAAGCATGGTCTAGGACAAGAAGATACTAAAATGTCTGGAAATTCCTTGAATTGTCAAGACTGCAATAAAAATCCTAATTCCCATGGATCGATGTTCCAATACGATGTGAAGCAAGGTTTACCTGAAGGCAATAGAGCAGCTTGGTTGCAGAAGCAATGGATTGAATCTCGTAATCTTGAGCTAGAAGAGCAGAAACTACAAATACAAGTTGAAATGTTGGAACTGGAGAAACAGAGGCTCAAGTGGCAGAGGTTTAGTAAGAAAAAGGACCGGGAATTGGAGAAAATGAGGATGGAAAATGAAAAAATGAAGCTTGAAAATGAACGTATAGCTTTGGAACTAAAGAGAAGGGAAATGGGTGCTGGCTTTAACTAG 1347 0.415 MEGNLSQGGMVPVGASFSGFDLSGSMRVHQQAEHPHNMHQPQTHLRQGSSVHSACHDGFPLAMGTLQNCDQTILMADFTKGDRSKNSASEDDEPSLTEDGADGRNEAVRGKKGSPWQRVKWTDEMVKLLITALSYIGEDSNSDSGNGGRRKFAVLQKKGKWKSISKVMAERGYRVSPQQCEDKFNDLNKRYKRLNDMIGRGTCCKVVENPALLDVLDYLSEKDKEDIRKILGSKHLFYEEMCSYHNGNRLHLPHDPVLQRSLQAALRNRDDHDNDDVKRSHHDDHEEDDQDVDTDDHDEFEETYASHRDNRGVYGALGGSAKKLKHGLGQEDTKMSGNSLNCQDCNKNPNSHGSMFQYDVKQGLPEGNRAAWLQKQWIESRNLELEEQKLQIQVEMLELEKQRLKWQRFSKKKDRELEKMRMENEKMKLENERIALELKRREMGAGFN 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1324 448 Coils Coil 410 442 - -
Lele48g1324 448 MobiDBLite consensus disorder prediction 32 53 - -
Lele48g1324 448 MobiDBLite consensus disorder prediction 80 116 - -
Lele48g1324 448 MobiDBLite consensus disorder prediction 267 287 - -
Lele48g1324 448 MobiDBLite consensus disorder prediction 83 116 - -
Lele48g1324 448 Gene3D - 121 193 - -
Lele48g1324 448 MobiDBLite consensus disorder prediction 267 307 - -
Lele48g1324 448 MobiDBLite consensus disorder prediction 35 50 - -
Lele48g1324 448 Coils Coil 380 407 - -
Lele48g1324 448 Pfam Myb/SANT-like DNA-binding domain 118 244 IPR044822 -
Lele48g1324 448 PANTHER F16F4.11 PROTEIN-RELATED 1 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1324 Lele-ChrLele48 17448413 17449759 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele48g1324 Myb_DNA-bind_4 1e-22 CL0123