Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1323 ATGCTGGGGGACTCAACTGCGTTAGGGGGTGGCGGGGCTAGCTCTGGAGATGATGCGGCGGCGGCGGTGGCGGCTGCATCTGAGGGAGGAGTTGCAGAACCGCATGACGGTGGTGAGTCAGCAGTTGCGGCGGCGGGAAGTGGTGGTGGAGGAGCTGGATCGAATTCAGGCGAGGAGGGTGGTGGTGGCGAGAGAAGTTTCGGCGGCAACCGGTGGCCCCGCCAGGAGACTCTGGCGCTCTTGAAGATACGCTCGGACATGGACGTTGCGTTTCGAGATGCCAGCGTGAAGGGTCCCTTGTGGGATGAAGTTTCCAGGAAGCTAGCAGAACTCGGATACCAGAGAAGCGCCAAGAAGTGCAAAGAGAAATTCGAGAACGTTTACAAGTACCACAAGCGAACTAAAGAAGGCAGAACCGGAAAACCATACGGCAAAACGTACCGTTTCTTTGATCAGTTACAAGCTCTCGATCACCATCATCAAAACCAAAACCAACCTCATAATGCTAATTCTTTATTGATTCAATCCTCTTCTTCTAATTCTGCCCCTCTACCTGCACCGCCAGTCTCCGTCATACCCACCACCCAACCTCCTCCTTCTGTAATAGTGGCGCCACAAGTAACGCCTCCTCCTCTTCCTCCTCATGTTAATGCTGCCACTACTACTGTTCCATCAATGAACACTACTTCAATCCCTCCATTGTACCCACCACCCCCAGCACTAGCAGCAGCAACAACGATAACAGCAAACCCTACTTTTTTACCCTCGTTCGCTAGCATACCGATGGATCTCTTGTCGAATTCTAGTTCATCTTCGACTTCGTCGGATGAGACAATAGAGGCTCGGCGGAGGCGGAAGCGCAAGTGGAAGGACTTCTTCGAGAGGTTGATGAAGGAGGTGATAGAGAGGCAGGAGGAGTTGCAGAAGAGGTTTCTGGAAGCCATAGAGAAACGCGAGCACGAGAGAATGGTTCGAGAGGAATCGTGGAGAATGCAGGAGATGGCCAGGATCAATAAGGAGAGAGAAATATTGGCGCAGGAAAGATCCATTGCCGCCGCTAAAGACGCTGCTGTAATGGCATTCTTGCAGAAGATCGCTGAACAGCAGAATCTCGGCCAACCGGGCGCACCGACAACAAATAATATTAACATCCCCAATCCTCCAACGTCGCAGCCCACGGCAGCTCCCGCTCCAGTACCAGCACCAGTAATTGCACCTCCGCCGCCGCAGCCACTGCAACCTGTGACGGGGCAACAATCAACTTCAATTCTTTCTACTCCAATGCCGGCTCCGCCTCCATCCACGCAACAAGGTATAACGAGCATGGAAATTGTAGCGAAAACTGACAACGGGGATAACAGTAATTTGACGACTCCAAGTACCTCGTCGTCGAGGTGGCCTAAAGTGGAGGTAGAGACGCTCATAAAACTACGGACAAACATGGACGCGAAATACCAGGAGAATGGGCCGAAGGGGCCGTTGTGGGAGGAAATCTCCGCCGCAATGAGGAGACTGGGGTACAACCGTAGCTCCAAGAGGTGCAAAGAGAAGTGGGAGAACATCAACAAATACTTCAAGAAGGTGAAGGAGAGCAACAAGAGAAGACCAGAAGATTCCAAGACGTGCCCGTACTTTCACCAGCTGGATGCCCTATACAGGGAGAAGAGTTTCAAGCTGCAGTCAGCGCAGCCACCGCCGCCGGAGAACATGATGTCTACGCCGCTCATGGTACGCCCAGAGCAGCAGTGGCCACCACAGCCGCAGCAACAAGAAACACGGCCGTCGTCGGGGCCGCAGGTGATGATGGGAAGCGCGGGGGCTGATGCAATGGAAGAAGACGAAGAAGAGGACGATGATGGAGGAAGTGGTACCTACGAGATTGTGGCAAGCACGCCAGCTACTTCAGTGGGTGCTTCTGAGTGA 1923 0.5346 MLGDSTALGGGGASSGDDAAAAVAAASEGGVAEPHDGGESAVAAAGSGGGGAGSNSGEEGGGGERSFGGNRWPRQETLALLKIRSDMDVAFRDASVKGPLWDEVSRKLAELGYQRSAKKCKEKFENVYKYHKRTKEGRTGKPYGKTYRFFDQLQALDHHHQNQNQPHNANSLLIQSSSSNSAPLPAPPVSVIPTTQPPPSVIVAPQVTPPPLPPHVNAATTTVPSMNTTSIPPLYPPPPALAAATTITANPTFLPSFASIPMDLLSNSSSSSTSSDETIEARRRRKRKWKDFFERLMKEVIERQEELQKRFLEAIEKREHERMVREESWRMQEMARINKEREILAQERSIAAAKDAAVMAFLQKIAEQQNLGQPGAPTTNNINIPNPPTSQPTAAPAPVPAPVIAPPPPQPLQPVTGQQSTSILSTPMPAPPPSTQQGITSMEIVAKTDNGDNSNLTTPSTSSSRWPKVEVETLIKLRTNMDAKYQENGPKGPLWEEISAAMRRLGYNRSSKRCKEKWENINKYFKKVKESNKRRPEDSKTCPYFHQLDALYREKSFKLQSAQPPPPENMMSTPLMVRPEQQWPPQPQQQETRPSSGPQVMMGSAGADAMEEDEEEDDDGGSGTYEIVASTPATSVGASE 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1323 640 MobiDBLite consensus disorder prediction 371 437 - -
Lele48g1323 640 MobiDBLite consensus disorder prediction 558 640 - -
Lele48g1323 640 MobiDBLite consensus disorder prediction 265 284 - -
Lele48g1323 640 Coils Coil 290 317 - -
Lele48g1323 640 MobiDBLite consensus disorder prediction 371 388 - -
Lele48g1323 640 Pfam Myb/SANT-like DNA-binding domain 70 156 IPR044822 -
Lele48g1323 640 Pfam Myb/SANT-like DNA-binding domain 464 551 IPR044822 -
Lele48g1323 640 MobiDBLite consensus disorder prediction 389 414 - -
Lele48g1323 640 Gene3D - 72 133 - -
Lele48g1323 640 Gene3D - 466 527 - -
Lele48g1323 640 FunFam Trihelix transcription factor GT-2 72 133 - -
Lele48g1323 640 CDD GT1 70 135 - -
Lele48g1323 640 FunFam Trihelix transcription factor GT-2 466 527 - -
Lele48g1323 640 PANTHER FI21293P1 40 594 - -
Lele48g1323 640 CDD GT1 464 529 - -
Lele48g1323 640 ProSiteProfiles Myb-like domain profile. 458 522 IPR001005 -
Lele48g1323 640 MobiDBLite consensus disorder prediction 582 599 - -
Lele48g1323 640 MobiDBLite consensus disorder prediction 1 71 - -
Lele48g1323 640 MobiDBLite consensus disorder prediction 448 467 - -
Lele48g1323 640 MobiDBLite consensus disorder prediction 175 197 - -
Lele48g1323 640 SMART sant 68 130 IPR001005 -
Lele48g1323 640 SMART sant 462 524 IPR001005 -
Lele48g1323 640 ProSiteProfiles Myb-like domain profile. 70 128 IPR001005 -
Lele48g1323 640 MobiDBLite consensus disorder prediction 608 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1323 Lele-ChrLele48 17430351 17433140 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1323 64 583 Trihelix Transcription Factor Family AT1G76880 54.927 1.91e-169 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele48g1323 Myb_DNA-bind_4 1.9e-22 CL0123