Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1320 ATGATGAGGAGTTCACTTAGGTTCGTGGCAAGAAACAAGGCCTATAATGCAATGATCTTCATTCAGATTATTAGCTCTGGCTTGGCTTTGTTGTCCAAAGCTGCAATTTCCAAGGGAATGAACCCTCTTGTGTTTGTTGTTTATCGCCAGGCTTTTGCCTTCGTTTCCTTGTGTCCCTTCGCATTCTTCGATCGTAAACATGATGATGCTCCCTTGTCATTCAACTTACTGTGCAAAATATTTCTTGTTTCCTTTGTTGGGTTAACAGTAGCTACAAACTTATTCTCTGCTTCACTGAACTATGTGTCCGCCACATTAGCTTCAGCCTTCGCAAATATCATCCCGGCCGTTACTTTCATCGTGGCTGTTCTATTCAGAGTGGAAAGAGTTTCGATGAAGGAGATATATGGGAAAGCGAAGATTGTGGGGACAATTTTGAGCCTTTGTGGGGCAATAATATTTGGTTTAGTTAAAGGACCTCCAATAATAAGCTCCATCAAGGGGCATCCATCAAATGAGCAGAATGATTCTCACTCAAAAGGAGATCAAATCAAAGGAGTTATTATGATGCTCTCATCAAACGTCTCTATGGCTTTGTGGCTTATTTTGCAAGGATTTGTTGTGAAGAAATACCCAGCAAAACTTCGCTTCACAGCTCTACAGTGCTTATTTTGCTGTATACAAACATCTGTTTTGGCTGTGATAATGGAAAGGGACCCTTCAGCATGGAAGCTTGGATGGGACGTTAACCTTCTTGCTGTAGTTTACTGTGGTGTGATCGTAACAGGGATTACATATTGGCTGCAACTGAGCGTGATAGAGGAGAAAGGCGCAGTGTTCTCAGCATTGTTCACTCCTCTTGCTCTTATAATCACTGCCATTTTCTCGTCAATTGTCTGGCGAGAGACCCTTCATTGGGGAAGTGTTGGGGGGATGATTTTGGTGGTGACTGGACTTTACAGTGTGTTGTGGGGGAAGAACAGAGAAACTGAACAAGAGCAAAGCCATGAAACTGAAAACACACAACAATCAAGAGACACTACCACTACTACATTGGACATTCCAACAAAGAACGCACCAATATCTAGTATCGCACCCTCATCACAGTAG 1110 0.4261 MMRSSLRFVARNKAYNAMIFIQIISSGLALLSKAAISKGMNPLVFVVYRQAFAFVSLCPFAFFDRKHDDAPLSFNLLCKIFLVSFVGLTVATNLFSASLNYVSATLASAFANIIPAVTFIVAVLFRVERVSMKEIYGKAKIVGTILSLCGAIIFGLVKGPPIISSIKGHPSNEQNDSHSKGDQIKGVIMMLSSNVSMALWLILQGFVVKKYPAKLRFTALQCLFCCIQTSVLAVIMERDPSAWKLGWDVNLLAVVYCGVIVTGITYWLQLSVIEEKGAVFSALFTPLALIITAIFSSIVWRETLHWGSVGGMILVVTGLYSVLWGKNRETEQEQSHETENTQQSRDTTTTTLDIPTKNAPISSIAPSSQ 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1320 369 PANTHER WAT1-RELATED PROTEIN 16 335 IPR030184 GO:0016020|GO:0022857
Lele48g1320 369 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020
Lele48g1320 369 Pfam EamA-like transporter family 19 153 IPR000620 GO:0016020
Lele48g1320 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 328 - -
Lele48g1320 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 154 - -
Lele48g1320 369 MobiDBLite consensus disorder prediction 341 369 - -
Lele48g1320 369 MobiDBLite consensus disorder prediction 330 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1320 Lele-ChrLele48 17408555 17410311 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1320 8 346 Nodulin-like Gene Family AT5G07050 33.711 4.19e-73 231