Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1318 ATGAGAGGTGCGTCAGCTTCAACAACCAGAGAGGAAGGGAGAGAGACAGCAATGGATTTCTTCATTGAAGGTGTGGGGGAGAGCTCCTCTCCACCGCGCACCTTGAGCGGTTTCGGCAACTTTGATGTGAGGAACGATGTGTACAATCGCTTAGTGGAAAACGGTCATGGCCAAGAGGCGGATTTTCGTGAGCAGCTAGATGCTCACTTCAACCGATTGCCTCCAAGTTATTTGCTTGATGTTAACATAGACAAAGCTGAAGATGTCTTATTACATCAGAAACTTCTTGCTTTGGCAAGGGACCCAAGCAAGCGCCCTGTGTACAATATACGCTTTTTGGAGGACATTTCTACTAGAATGGATGGTCAAGATCAACAAATTGTAGCTGCTAATTCTAGCACAAGGCCGTCTTCTCCCCCATCTAATGGGGAAGCTGCATCATCTCATAAGAGGGCAAGAGACTGTGCCGCTGAGTTTGAGCCTTGCTCTAAGCTTGAAGATCTAAATTTGGATGTCGGAAAGAACTCCAAGGAGGTTACTGACAATTACTCCCAGATGCATGAGGAACTGAGTGTTCCAGTTCATGAAGTTATTTTTTCTGCCATTGACAAGCCAAAGCTTTTAAGCCAGCTGTCTGCATTGCTGTCTGATATTGGACTTAACATACGCGAAGCACATGTTTTTTCCACGACTGACGGCTATTCTCTTGATGTATTTGTTGTGGATGGATGGCCAATAGAGGACACACATGGGTTGTATGAGGCCATGGAGAAAGCTGTTGCAAGAAGTGAGGGGTCTTGGTCTCGTTCTTTAAATTCCCATCTGACTCTGGAGAAGGCCATAATAGCAGAAGAAAAATCTGGTGATTGGGAAATAGACAGGAGGCTGCTTAAGATAGGAGATAGAATAGCATCTGGATCTTGTGGGGATTTGTATCGTGGAGTTTATCTTGGTCAAGATGTTGCTGTTAAGATTTTGAGATCTGAGCATTTGAACGATGCTTTAGAGGATGAGTTTGCTCAAGAAGTAGCAATTCTTAGGCAGGTGCATCATAAAAATGTTGTACGTTTCATTGGCTCATGTACAAAATCTCCACATTTGTGGATTGTAACAGAGTATATGCCTGGAGGAAGTCTGTATGATTACTTGCATAAAAGCCATAATATGTTGGATCTCTCTCAACTACTGAAGTTTGCGATTGATGTCTGCAAGGGAATGGAGTATTTGCACAGAAACAATATAATTCACAGGGATCTGAAGACAGCCAATCTATTGATGGATACCCACAATGTTGTTAAAGTAGCAGATTTTGGAGTAGCTCGGTTCCTAAATCAGGGGGGAGTGATGACAGCAGAAACTGGAACATATAGATGGATGGCTCCAGAGGTTATAAACCATCAACCCTATGATCAGAAGGCTGATGTATTCAGTTTTTCCATAGTATTGTGGGAACTAGTAACTGCAAAGGTACCATATGATGCCATGACTCCACTACAAGCTGCCCTAGGTGTGAGACAGGGGTTACGCCCGGAACTTCCAAAGCAAGGGCACCCTAATCTAATAGATTTAATGCAAAGGTGTTGGGAAGCAATTCCAGCCAACCGGCCATCCTTCTCTGAGATAACAGTTGAACTGGAAAATCTCCTTAAAGAAGTTGAGAATGATTCAGAAACTAATGGACTTGGTGATGGCGAAATAGAAGGGGTTGGCGACGGAGATAGAGGCAGTGGATGTGGAGTATTGTGCGAAGGGCTTGGTGATGGAGAAAGAGAAGGAGGAGAGAGGGGGATTCAGATCCACTCTTCTCTGGCGGAGGCGGCGAGGAAACTGGCGATGGAGGTGAAGGATGGTACTTGGGAGGATGAGGAGGACGAGGATGCATTGGCCTCCTTGGAGACGGCGGAGGATCGTTCTTTGGAGGAGGAGGAGGAGATGTGTAGACGTAGGTATGAGAGCTTATTTGAGAAGGCAAATTCAGGGACACTAGCCAACACAAATATGAGGGAGGCCATTAGAGAGATCTCATTTCGGCTTTTCAAATGGGCGTTGGCTGTGCTTCTTCCAGAGCAAGAGATTCCCTTTATATAG 2088 0.4507 MRGASASTTREEGRETAMDFFIEGVGESSSPPRTLSGFGNFDVRNDVYNRLVENGHGQEADFREQLDAHFNRLPPSYLLDVNIDKAEDVLLHQKLLALARDPSKRPVYNIRFLEDISTRMDGQDQQIVAANSSTRPSSPPSNGEAASSHKRARDCAAEFEPCSKLEDLNLDVGKNSKEVTDNYSQMHEELSVPVHEVIFSAIDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVDGWPIEDTHGLYEAMEKAVARSEGSWSRSLNSHLTLEKAIIAEEKSGDWEIDRRLLKIGDRIASGSCGDLYRGVYLGQDVAVKILRSEHLNDALEDEFAQEVAILRQVHHKNVVRFIGSCTKSPHLWIVTEYMPGGSLYDYLHKSHNMLDLSQLLKFAIDVCKGMEYLHRNNIIHRDLKTANLLMDTHNVVKVADFGVARFLNQGGVMTAETGTYRWMAPEVINHQPYDQKADVFSFSIVLWELVTAKVPYDAMTPLQAALGVRQGLRPELPKQGHPNLIDLMQRCWEAIPANRPSFSEITVELENLLKEVENDSETNGLGDGEIEGVGDGDRGSGCGVLCEGLGDGEREGGERGIQIHSSLAEAARKLAMEVKDGTWEDEEDEDALASLETAEDRSLEEEEEMCRRRYESLFEKANSGTLANTNMREAIREISFRLFKWALAVLLPEQEIPFI 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1318 695 FunFam Serine/threonine-protein kinase isoform 1 287 375 - -
Lele48g1318 695 ProSiteProfiles Protein kinase domain profile. 297 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g1318 695 PRINTS Tyrosine kinase catalytic domain signature 473 495 IPR001245 GO:0004672|GO:0006468
Lele48g1318 695 PRINTS Tyrosine kinase catalytic domain signature 516 538 IPR001245 GO:0004672|GO:0006468
Lele48g1318 695 PRINTS Tyrosine kinase catalytic domain signature 408 426 IPR001245 GO:0004672|GO:0006468
Lele48g1318 695 PRINTS Tyrosine kinase catalytic domain signature 371 384 IPR001245 GO:0004672|GO:0006468
Lele48g1318 695 PRINTS Tyrosine kinase catalytic domain signature 454 464 IPR001245 GO:0004672|GO:0006468
Lele48g1318 695 Gene3D Phosphorylase Kinase; domain 1 286 374 - -
Lele48g1318 695 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 144 551 - -
Lele48g1318 695 SMART serkin_6 297 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g1318 695 Pfam Protein tyrosine and serine/threonine kinase 297 544 IPR001245 GO:0004672|GO:0006468
Lele48g1318 695 CDD STKc_MAP3K-like 303 545 - -
Lele48g1318 695 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Lele48g1318 695 ProSiteProfiles ACT domain profile. 196 270 IPR002912 -
Lele48g1318 695 MobiDBLite consensus disorder prediction 129 152 - -
Lele48g1318 695 SUPERFAMILY Protein kinase-like (PK-like) 287 549 IPR011009 -
Lele48g1318 695 SUPERFAMILY ACT-like 195 262 IPR045865 -
Lele48g1318 695 Gene3D Transferase(Phosphotransferase) domain 1 375 563 - -
Lele48g1318 695 MobiDBLite consensus disorder prediction 129 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1318 Lele-ChrLele48 17392185 17403209 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1318 40 574 MAP Kinase Kinase Kinase AT4G35780 48.370 6.91e-177 515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele48g1318 PK_Tyr_Ser-Thr 5.8e-73 CL0016