Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1284 ATGCATGAAACAAATCAGGGCATCAATGCTAAGATATGGAAATTATTCGAATCTTATCTTGTTCATGACTTACAAAAAAAAGCGAAAATTCAGATAATTGGCGGTTTTGAGTGCGTTGGAGGTGAAATTTCCGCCTTTCAGGGTGATACGAAGTTGACGTCTCTGAGTTTTGGAAGAAACCTTACCTGCAAGCGTCTTGTCATGGATCGTAATGGTTATGTGGATGATAAAAGTGAAAGTAGACTGTATATCGGGAACCTTGATCTTAGAATAACAGAAGCTGCTCTTATAAAAATGTTTTCTCCATATGGGAAGATTGTATCTGAGGATTTCTTGTGGCACACTCGTGGCCCTAAGCGTGGAGAGCCACGTGGCTTTGCTTTTATCCAGTATAGCTCGAAAGAGGAAGCGGAATTGGCCAAGGAGAAAATGCACGGGAAGTTAGCCTGTGGCCGGCCGTTGGTTGTTCGGCTCGCCAGCGAGAAGTGCCTGATAGAAACAGCCAATAACTCGCCAAAAGTCATGGGAGAAGGGCACAAGATACACCTTACTGGTAATGGCATGGGACAGACAAGTCGTAGTGCAAAAGTAGCTGCAATAAAGAACAAATTGAAATCAATAGAGGAGGAGAGCTCTAGGCCAAAGAAAAAGAAGCAAAGTGATGATGTATCATGA 675 0.4296 MHETNQGINAKIWKLFESYLVHDLQKKAKIQIIGGFECVGGEISAFQGDTKLTSLSFGRNLTCKRLVMDRNGYVDDKSESRLYIGNLDLRITEAALIKMFSPYGKIVSEDFLWHTRGPKRGEPRGFAFIQYSSKEEAELAKEKMHGKLACGRPLVVRLASEKCLIETANNSPKVMGEGHKIHLTGNGMGQTSRSAKVAAIKNKLKSIEEESSRPKKKKQSDDVS 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1284 224 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 118 219 - -
Lele48g1284 224 CDD RRM_RBM18 81 160 IPR039157 -
Lele48g1284 224 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 82 154 IPR000504 GO:0003723
Lele48g1284 224 Gene3D - 77 168 IPR012677 -
Lele48g1284 224 SMART rrm1_1 81 157 IPR000504 GO:0003723
Lele48g1284 224 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 80 161 IPR000504 GO:0003723
Lele48g1284 224 MobiDBLite consensus disorder prediction 204 224 - -
Lele48g1284 224 SUPERFAMILY RNA-binding domain, RBD 72 166 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1284 Lele-ChrLele48 17174006 17177511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1284 80 162 Eukaryotic Initiation Factors Gene Family AT1G71770 40.964 8.96e-12 62.0