Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1269 ATGGATTCGAGTCATGTGAAGAATTTCGATCGCTCCAAGGCTGACAGCGCAGGACCGAATCCAGGTCGAAAGGTTCGGGTCGTGGCAAAGGTCAGGGGCTTTGCATTTCCGGAGGTCGAGGCTCAGAGTGGGTCTTCGAGACCGGGGGACTGGATTTCGGTGAACAAGCCTCCCGGAGAGAGTTCAGAAGTCGCAATCTCCTTCAAGGACCATTCTTCCAGGAACAGAGACCACTGTTATGGGTTTGATCCTAGACCTTTTCCTGAACTAATCATGATCGGTTCTGCTAAGATACCTGGTTTGTCAGTGCTTGCTGTGGCTGAGTTTCTTTCACTGGCTGAACAAAATCGCAAATCTATTGCTATATCAATGTATGAGGTTGATTATCAGGAGCATGCTGTTGATTTATTAAATCCAGAACAGCCAGCCATTTTAGTTCTTGAAGACCGAGGCCATATTCAGTTTAAAGGGCTTTCTCAGATTCGTGTGAAATCTATTTCAGAGTTTCAGAAAGCATACTTCACTGCTTGTGCTCCTCGAAAAGCAGCCATGAAAAAGGGAAATGACCATGCTCGTAGGACCCATGTGGGATTAATAGTTCATGTCTTTTCTGAAGCTAAAGCCACAGAAACTGGTTCTGTGGGCAAAATGAATTTTGTTGACTTGGCAGACGCCACAAAGAAAAGTGAAAGCTGTTCTGCAAGGCAGATGATACGTACATCTCATAAGAGTAACCTGCCCAAGAGTGTGTCTTCTACGGCAAAAAACTTAACTAGCTCTCGATCACATATCCGTGAAAAGAAAGTTGATGTGATAAAATCTGCAACTAAAGGAAGGAAATTATTTGATGAGGCAAGTCATTCTGCTAAAGCTGAGAAGGAAAAATCCATTGTGCCTGTTACTGAAGCATTATTGCCTTCATCAATGGATGACTCAGTTTCAGATGCTAGGCATCCAGTAGAACTCATGATAGAAAATGATGACTCAGTTTTAGATGCTAGGTATGAAGCAGAACTCATGGTGAAAAAGGCTGTCCCTGAGAAAATTGTGGATCATGGAGAGGAGCATACTCCTAATTCTGTCAAGTATAAGAAAGCATTGTCCACGGACTCTATAATACAAGAAGGTCATTATATGGATAAGGAAAACGACAGTTTCATTGCTAATAGAGATGAATCACCACCAATTAGTGCTCAACTACGTGAACTATCAAACAATTTGAAGCTTCTCTTATCAACCCCAAGAAGCGTGAAATTACCAGAACAGGACTGCATCATATCACTTGACAATCAGGTCTCTTCTACACATATTTTGGAACCAAAAACTCCTGTCACAGAACAAACTATGGGTGCTATTGATAGATGGAATGTCATGAATGCCAAAAGTCCTTGGGAAACATACAGTGCGCGCAGTTCAGGAATGAAGGGGATTGGTGAGAAAAGAGCAACCTACATACTTGAGCTTCGCGATGAATCTCCTGAACCTTTCAAGAGTCTTGATGATTTACAGGACATTGGACTTTCAGCAAAGCAGGTGTCTTTCTTCTCTTGA 1551 0.4255 MDSSHVKNFDRSKADSAGPNPGRKVRVVAKVRGFAFPEVEAQSGSSRPGDWISVNKPPGESSEVAISFKDHSSRNRDHCYGFDPRPFPELIMIGSAKIPGLSVLAVAEFLSLAEQNRKSIAISMYEVDYQEHAVDLLNPEQPAILVLEDRGHIQFKGLSQIRVKSISEFQKAYFTACAPRKAAMKKGNDHARRTHVGLIVHVFSEAKATETGSVGKMNFVDLADATKKSESCSARQMIRTSHKSNLPKSVSSTAKNLTSSRSHIREKKVDVIKSATKGRKLFDEASHSAKAEKEKSIVPVTEALLPSSMDDSVSDARHPVELMIENDDSVLDARYEAELMVKKAVPEKIVDHGEEHTPNSVKYKKALSTDSIIQEGHYMDKENDSFIANRDESPPISAQLRELSNNLKLLLSTPRSVKLPEQDCIISLDNQVSSTHILEPKTPVTEQTMGAIDRWNVMNAKSPWETYSARSSGMKGIGEKRATYILELRDESPEPFKSLDDLQDIGLSAKQVSFFS 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1269 516 Gene3D Kinesin motor domain 89 246 IPR036961 -
Lele48g1269 516 MobiDBLite consensus disorder prediction 40 60 - -
Lele48g1269 516 MobiDBLite consensus disorder prediction 1 23 - -
Lele48g1269 516 SMART kinesin_4 22 263 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele48g1269 516 MobiDBLite consensus disorder prediction 238 259 - -
Lele48g1269 516 PANTHER KINESIN-RELATED 100 231 IPR027640 GO:0003777|GO:0007018
Lele48g1269 516 MobiDBLite consensus disorder prediction 238 262 - -
Lele48g1269 516 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 232 IPR027417 -
Lele48g1269 516 Pfam Kinesin motor domain 92 236 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1269 Lele-ChrLele48 17052913 17059005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1269 92 278 Calmodulin-binding Proteins AT5G65930 26.633 2.66e-08 55.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele48g1269 48 17052913 17059005 Lele48g1269 48 17052913 17059005 ECH
Lele45g0176 45 1424978 1439226 Lele48g1269 48 17052913 17059005 hybridization
Lele46g0193 46 1168290 1174111 Lele48g1269 48 17052913 17059005 hybridization