Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1268 ATGTCACTCAAGGGGGCCAAATTCTCTTCCCTGAGTCAGAGCTCACATGCTAGATGCCCTGTTCTTGAGGGTGAAATGTGGTCTGCAACTAAATCCTTCTATGCAAGACCAACTGGTGAGGAAATGATCTCATCCTCATTATATGGTGGGGATGAATGTACGGATGAGGATGATCATTGTCCCACCTGGGCCGCCATGGGAGAATGTCAAAGAAATCCTGTATTCATGATTGGCTCTCCTGATTACTATGTTTTTGATAAGCTTGTTGCATCTTCCTTTGGTGCAAGGCATACAATCCTAGAATTTCTTGTGTCATATGGCAATATAAACATGTTCCCTTGGATTTTAGATATCCTCCTAGCCCCCCTCACCTTCCTATTCATATTCATTATTGCAGCCACCTTAAAGAGCAGCCGCCGTAAACATGGGTGGAAACAACCGCCCGGTCCGCCGTGCTTCCCAGTGATCGGCCACCTCCACCTGCTTGGCAAACTCCCACATCGCTCCCTCCAAACCCTAGCCACAACATACGGACCCATCATGAGCCTAAGGCTTGGACATGTCCCAACCATAGTGCTGTCCTCGGCGGAAGCTGCCGAGCTCTTCATCAAGTCCAACGACACCGTGTTCGCCAACCGGCCTCTGGTCGAAGCCTTCGAGTACTTCTCCTATGAATTCAAAGGGTTGGTTTTCTCAGAGTACGGTCCTTACTGGCGTAGCATGAGAAGGCTGTGCAAGCTGAACCTTCTTAGCGCTTCAAAGGTAGAGTCCTTCGCTACTTTGAGGATGAAGGAGGTTGAAAAAATGGTGGAGGAGGTTGATTACGCTGCTGTGGCGGGTCAAATTATAAACCTTAGTGAAGTTGTCAATGATGTTCTGGAAGGTATGGTTTATAAGACGATATTGGGGTGTGATACTAATAAGGACTATGGACATGATTTGAAGGGGATTGTTCAAGAGGTTATGCATCTTTCTGGCGCTTTTAATCTTGCTGATTATGTTCCTTGGCTTGGAGTGTTTGATTTTCAGGGATTGAGAAGACGATTCAAGAGAACTAGCAAAGAAATGGATGAAGTGTTGGAGGAGATATTGAAGGAGCACGAGCAAGCTTTCAGTTCCAAAGCACACCACAACGACTTCATCGACATACTACTCTTGCTGATGTACGAAAATGACGACGTTGATCGAACCAACATCAAGGCCATCGCAGTCGACATGATCGGAGCCGCCCTAGAGACCTCAGCCACTATCATCGTGTGGGCGCTATCGGAACTTCTGAGAAACCCCAGAGTCATGAAAATCCTCCAACGCGAGCTCGATGATGTAATTGGATCAGACAACCTTGTAGAAGAGAAAGTCATCGGGAAATTGAGCTACTTAGATATGGTGATTAAAGAGACCTTCAGATTGCACCCGGCAGGGTCCTTGCTACCTCGAGAGACACTCGAGGATGTCGAGGTTGGTGGTTATTACGTAAAGAAGAAGACGAGGATCATAGTGAACATGTGGGCGCTGGGGCGAGATCCTAAGGCTTGGCCGGAGAAGACGGAGGAGTTTTGGCCAGAGAGGTTTATGGAGACGGAGGTGGATTTCCGAGGACGAGATAGTCTAATGTTTATGCCGTTCGGGACTGGTCGGAGAGGGTGTCCGGGGATACAGTTGGGGCTGTGCAAGGTGAAGCTGGTGGTGGCTCAGTTGATCCATCGTTTCTGGTGGGAGCTTCCGTCGGGGATGACACCAGAAGATCTGGACTTGAAGGAGAAGTTTGGTCTCTCAATGCCGAAAGCTGAGCCCCTGCTCGCTGCACCAAGTTGTCGTTTTCGTAAAAAATCTTAG 1836 0.4837 MSLKGAKFSSLSQSSHARCPVLEGEMWSATKSFYARPTGEEMISSSLYGGDECTDEDDHCPTWAAMGECQRNPVFMIGSPDYYVFDKLVASSFGARHTILEFLVSYGNINMFPWILDILLAPLTFLFIFIIAATLKSSRRKHGWKQPPGPPCFPVIGHLHLLGKLPHRSLQTLATTYGPIMSLRLGHVPTIVLSSAEAAELFIKSNDTVFANRPLVEAFEYFSYEFKGLVFSEYGPYWRSMRRLCKLNLLSASKVESFATLRMKEVEKMVEEVDYAAVAGQIINLSEVVNDVLEGMVYKTILGCDTNKDYGHDLKGIVQEVMHLSGAFNLADYVPWLGVFDFQGLRRRFKRTSKEMDEVLEEILKEHEQAFSSKAHHNDFIDILLLLMYENDDVDRTNIKAIAVDMIGAALETSATIIVWALSELLRNPRVMKILQRELDDVIGSDNLVEEKVIGKLSYLDMVIKETFRLHPAGSLLPRETLEDVEVGGYYVKKKTRIIVNMWALGRDPKAWPEKTEEFWPERFMETEVDFRGRDSLMFMPFGTGRRGCPGIQLGLCKVKLVVAQLIHRFWWELPSGMTPEDLDLKEKFGLSMPKAEPLLAAPSCRFRKKS 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1268 611 Pfam ShK domain-like 52 76 IPR003582 -
Lele48g1268 611 Coils Coil 342 362 - -
Lele48g1268 611 PANTHER CYTOCHROME P450 93A3-LIKE 125 607 - -
Lele48g1268 611 Pfam Cytochrome P450 147 595 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele48g1268 611 SUPERFAMILY Cytochrome P450 140 602 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele48g1268 611 FunFam Cytochrome P450 83B1 133 602 - -
Lele48g1268 611 PRINTS P450 superfamily signature 540 549 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele48g1268 611 PRINTS P450 superfamily signature 409 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele48g1268 611 PRINTS P450 superfamily signature 549 560 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele48g1268 611 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele48g1268 611 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 542 551 IPR017972 GO:0005506|GO:0016705
Lele48g1268 611 Gene3D Cytochrome P450 136 604 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele48g1268 611 PRINTS E-class P450 group I signature 398 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele48g1268 611 PRINTS E-class P450 group I signature 549 572 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele48g1268 611 PRINTS E-class P450 group I signature 418 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele48g1268 611 PRINTS E-class P450 group I signature 174 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele48g1268 611 PRINTS E-class P450 group I signature 539 549 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1268 Lele-ChrLele48 17047265 17051706 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1268 111 607 Cytochrome P450 AT5G07990 38.356 4.99e-115 351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele48g1268 48 17047265 17051706 Lele48g1268 48 17047265 17051706 ECH
Lele45g0177 45 1445312 1449784 Lele48g1268 48 17047265 17051706 hybridization
Lele46g0195 46 1179257 1182291 Lele48g1268 48 17047265 17051706 hybridization