Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1267 ATGGAAGGAAATATATTCTCGATTGGCAAGAGGAAGAAATCTTTCTTTGACTTAGAAAGCTACAGGGTAAGGGTTCACGGTCGACCTATTTGGACAACATATTACCAAACCGAAGATTCATTCAGTCAGCAAGGATCTACAAAAGATCTTCTACAAAATGCAAGCTTCTTTCATCTTCCTCCTCCTCTATGCGCCAAGAATATCGACAAGAGGGTGACCCTGAGAGATGTCCCTAGTGATCAAGCTGATGGCATTTCCATACCAAGGATTTCGAAGTCTGACCCTTGTGACCCATTCAGAAGCCACAAGGGAATGGCTCCTAAGCAGCCAAGTACGGGCCTTTTCGTCGGGTTGAACAAGGGCCATGTGGTGACCAAGAAGGAATTGGCTCCACGCCCATCAAACCGCAAGGGGAAAACAAGCAAGCGTGTCCATTTCGTGAGGTCATTGATAAGAGAGGTTGCAGGATTTGCTCCATATGAGAAGCGTATAACTGAGCTTCTCAAGGTTGGTAAAGATAAAAGAGCTTTGAAGGTGGCCAAGAGAAGGTTAGGCACTCACAAGAGGGCTAAGAAGAAGCGTGAGGAGATGTCCAATGTTCTCAGGAAGATGAGGTTATTTCACAACCTTTTAATGGCTGGTGGAGGTGGAGAGAAGAAGAAGGCTTAA 669 0.4559 MEGNIFSIGKRKKSFFDLESYRVRVHGRPIWTTYYQTEDSFSQQGSTKDLLQNASFFHLPPPLCAKNIDKRVTLRDVPSDQADGISIPRISKSDPCDPFRSHKGMAPKQPSTGLFVGLNKGHVVTKKELAPRPSNRKGKTSKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRRLGTHKRAKKKREEMSNVLRKMRLFHNLLMAGGGGEKKKA 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1267 222 FunFam 60S ribosomal protein L36 105 209 - -
Lele48g1267 222 PANTHER 60S RIBOSOMAL PROTEIN L36 101 209 IPR000509 GO:0003735|GO:0005840|GO:0006412
Lele48g1267 222 ProSitePatterns Ribosomal protein L36e signature. 159 169 IPR000509 GO:0003735|GO:0005840|GO:0006412
Lele48g1267 222 Gene3D 60S ribosomal protein L36 103 209 IPR038097 -
Lele48g1267 222 Pfam Ribosomal protein L36e 112 205 IPR000509 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1267 Lele-ChrLele48 17041909 17045658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1267 105 221 Cytoplasmic Ribosomal Protein Gene Family AT3G53740 76.471 3.85e-54 167