Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1248 ATGCCATTCCGGCCGCCCTCTGAGGTGGTTGCCGTCGACCCATATCCACCGTGCTCCCTCTTCTTTCTCGCTTTCCTCTGCTTTCGCAGACGCACCAGAAAGCGCACCACCCCTTCTTCTGATTCCGAGTCAAAGCCTCCTCTTCTCTTCTCCTACTCCTCCCTCCGCCTCGCCACCACATCCTTTTCGACCCGAATAGGACATGGCGGGTTCGGACCTGTCTTCTCCGGCGTTCTTCCTTCCACCCGAAGGCCCATCGCCGTCAAGCTCATGGACTCTGCCTCTCTCCAAGGCGAGCGAGAGTTTCACAACGAGCTTTTCTTCGCTTCCAAGCTTTGTTCCCAACATGTCGTGGTCGCGATAGGCTCCGCCTTCGATAGGAATCGCCGAAGATTCTTGCTGGTGTACGATCTAATGCTCAACGGAAATCTTCAGGATGCTCTGTTGCGACGGAAGAGACCTGAGCTGATGAATTGGAAGAAACGTTTCTCCATAATTAATGATATAGCTAAAGGAATCCGTTACCTTCATTCTTGCGACCCACCTGTGATCCACGGTGATATCAAGCCGAGTAATATTCTACTGGACGCCTCTTTCTCAGCAAAAATTGCCGATTTCGGGCTCGCTCGGTTGAAATCCGAATCCCAGTACGACTTTGATATCTTCGGCGGAATCGATTATTCTGGGTCGGTTGTGCAGGAAACAGAGAGCGTAAATACTGGTTTTGAGGAGCAAACAGTGTCCATGTCAGAAACATCGCCCGAGGCAGACTTCCCTACCCAGGAAAACTGCGACAGGGGTAAGAAGAACGTTGAGAGGTTGAAGAGCAGATCAATGAAGGATTGGTGGAGGAAGGAAGACGATGACAATAAGAAAAAGAGCAAGAAGCAATTCGAATGGTGGAGAGAGGAGTACCGTGAGAAGCTGGAAAAGAAGGACAAGAAAAAGGGGTTCTACAGTGATGAAGAAGCATTTGACAGAGAGAGAACGAAGAGCAAAAGAAGAGGAAGGAGCATCGATTGGTGGTTCGACGGAATTAGCAGGATCAGCCACGATTCTTTCAGCGGAGAAATTCAAATTCCCAAGAGCGGTGGAATCAGCAGTACTCCAAGTTTGAAAGGAACCGTTTGTTACGTAGCTCCAGAGTACAGCCATGGCGGAGAAATATCGGAGAAATGCGATATATACAGTTTCGGGGTCCTATTGCTTGTTATTGTTTCAGGAAGACGGCCGATTGAGGTGCTGAGTGGTTCGCCGTTGTCAGAGCTTCAGAGAGGGAATCTATTGTACTGGGCACGCCATTGCGCGCGAAACGGGAAGCTTGTAGAACTGGTGGATCAGAGCGTGTGTATGAAGTCGCCTGAGAAAGAGGAGGCTCTGATCTGCATAAAAGTGGCTCTGCTCTGTCTGGTGAAGTCGCCGCCTCGCCGTCCTTCAATGGAAGAGGTTGTGAGAATGCTCTCCGGAGAGATGGAGCCACCGCAATTGCCGACTGAGTATTCGTCTTCATCACCATCTCTGTTTCCCTTCAAGCCTGGGAAAAACGCTCAGAGAAATTCTTGCACGGAACGATTTTAA 1578 0.5013 MPFRPPSEVVAVDPYPPCSLFFLAFLCFRRRTRKRTTPSSDSESKPPLLFSYSSLRLATTSFSTRIGHGGFGPVFSGVLPSTRRPIAVKLMDSASLQGEREFHNELFFASKLCSQHVVVAIGSAFDRNRRRFLLVYDLMLNGNLQDALLRRKRPELMNWKKRFSIINDIAKGIRYLHSCDPPVIHGDIKPSNILLDASFSAKIADFGLARLKSESQYDFDIFGGIDYSGSVVQETESVNTGFEEQTVSMSETSPEADFPTQENCDRGKKNVERLKSRSMKDWWRKEDDDNKKKSKKQFEWWREEYREKLEKKDKKKGFYSDEEAFDRERTKSKRRGRSIDWWFDGISRISHDSFSGEIQIPKSGGISSTPSLKGTVCYVAPEYSHGGEISEKCDIYSFGVLLLVIVSGRRPIEVLSGSPLSELQRGNLLYWARHCARNGKLVELVDQSVCMKSPEKEEALICIKVALLCLVKSPPRRPSMEEVVRMLSGEMEPPQLPTEYSSSSPSLFPFKPGKNAQRNSCTERF 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1248 525 Pfam Protein tyrosine and serine/threonine kinase 62 217 IPR001245 GO:0004672|GO:0006468
Lele48g1248 525 Pfam Protein tyrosine and serine/threonine kinase 369 487 IPR001245 GO:0004672|GO:0006468
Lele48g1248 525 Gene3D Transferase(Phosphotransferase) domain 1 139 252 - -
Lele48g1248 525 Gene3D Transferase(Phosphotransferase) domain 1 345 496 - -
Lele48g1248 525 MobiDBLite consensus disorder prediction 493 525 - -
Lele48g1248 525 Gene3D Phosphorylase Kinase; domain 1 49 138 - -
Lele48g1248 525 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Lele48g1248 525 ProSiteProfiles Protein kinase domain profile. 60 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g1248 525 SUPERFAMILY Protein kinase-like (PK-like) 43 502 IPR011009 -
Lele48g1248 525 MobiDBLite consensus disorder prediction 238 271 - -
Lele48g1248 525 FunFam Os07g0541700 protein 139 220 - -
Lele48g1248 525 MobiDBLite consensus disorder prediction 495 525 - -
Lele48g1248 525 SMART serkin_6 60 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g1248 525 PANTHER OS07G0586332 PROTEIN 21 287 IPR044576 -
Lele48g1248 525 MobiDBLite consensus disorder prediction 238 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1248 Lele-ChrLele48 16858388 16859965 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1248 369 499 Receptor kinase-like Gene Family AT4G04490 32.090 1.90e-10 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Lele48g1248 PK_Tyr_Ser-Thr 3.2e-25 CL0016