Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1247 ATGTTTCCTTCACAACGAGGCAATGAGATGGTCATCGAATTTTCTAGCCGTCCCCACCACCACCACCACCAACAACAACACAAGATCTCAGAGGATCTCATTCTGGACGGCGGCCATGCTCCTGCTTCTCTGGATATCATCAATTTTTCCGATAAACAATTACAAGGCAGTTCCAAAAACAAGCCGAAGAAGCTACTTTATGAGTCTTCTCGTGATAAGATTAACCATTATCGGAATTCTGATATCGAGTACACGAAGAAAGAGAAGCTCATTCACAGGGAGATTGAGAGACAAAGAAGGCAAGAAATGGCTACCCTCTATGCATCCCTTAGATCTCTTCTTCCACTCGAGTTCATCAAGGGGAAGCGTTCGATATCAGATCACATGAATGAGGCGAAGAACTACATAAAGCACCTGCAAAAGAAAATCAAAGAACTGAGCGCCAAGAGAGATGAACTGAAGAAACTATCAGAGAATTCTTGGAATCCAGAAACACAGGAGTGCGAAAAGTACACATATAGCGGCTTTTTCAGTGTTCACGAGATTAATAACAATGGTGGTGTCGGAATAGAAGTTTCTAGTTCCTTGGGAGAGGAAAGCTTTCCCCTTTCAAAATTGCTTAAACTGATGCTCGACGAAGGACTTGGAGTTGTTAATTCTGTTACCAGCCAAGTCAATGCAAGATTAATTCACTGTGTTCAGTGTGAGGTTATTAACAGTTCCGACCGTGTGGACATACCAGTGCTGAGAAGGAAAATTGTCAATCTAGTCCCATCATTTACATGTTCTGATTAA 795 0.4214 MFPSQRGNEMVIEFSSRPHHHHHQQQHKISEDLILDGGHAPASLDIINFSDKQLQGSSKNKPKKLLYESSRDKINHYRNSDIEYTKKEKLIHREIERQRRQEMATLYASLRSLLPLEFIKGKRSISDHMNEAKNYIKHLQKKIKELSAKRDELKKLSENSWNPETQECEKYTYSGFFSVHEINNNGGVGIEVSSSLGEESFPLSKLLKLMLDEGLGVVNSVTSQVNARLIHCVQCEVINSSDRVDIPVLRRKIVNLVPSFTCSD 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1247 264 SMART finulus 93 145 IPR011598 GO:0046983
Lele48g1247 264 Coils Coil 129 159 - -
Lele48g1247 264 CDD bHLH_AtORG2_like 88 158 - -
Lele48g1247 264 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 87 139 IPR011598 GO:0046983
Lele48g1247 264 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 85 154 IPR036638 GO:0046983
Lele48g1247 264 Pfam Helix-loop-helix DNA-binding domain 91 140 IPR011598 GO:0046983
Lele48g1247 264 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 68 257 IPR015660 -
Lele48g1247 264 FunFam Transcription factor bHLH126 79 167 - -
Lele48g1247 264 Gene3D - 79 170 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1247 Lele-ChrLele48 16853901 16855042 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1247 88 256 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 45.763 2.71e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele48g1247 HLH 2.2e-09 No_clan